CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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kni
(
Drosophila sechellia
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
FBgn0044208
T305289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kni
M06557_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Mathelier et al.(2014)
MA0451.1
0.989
1.000
kni
M06419_2.00
Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY
B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320
0.989
1.000
kni
M06420_2.00
Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT
B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320
0.989
1.000
kni
M06421_2.00
Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY
B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320
0.989
1.000
kni
M08225_2.00
Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR
ChIP-seq
Contrino et al.(2012)
Mf24
0.989
1.000
kni
M09687_2.00
Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN
Misc
Kulakovskiy et al.(2009)
kni
0.989
1.000
kni
M11189_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$KNI_Q6
0.989
1.000
AGAP010438
M02389_2.00
Anopheles gambiae
NRGDKCRNN
NNYGMHCYN
PBM
Weirauch et al.(2014)
pTH6429
0.983
0.871
knrl
M03930_2.00
Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT
SELEX
Nitta et al.(2015)
knrl_1
0.981
0.857
knrl
M03931_2.00
Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT
SELEX
Nitta et al.(2015)
knrl_2
0.981
0.857
knrl
M06422_2.00
Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT
B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323
0.981
0.857
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.958
0.800
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.958
0.800
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0203674
Nuclear receptor
7
77
QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKACRLRKCYNVGMSK
Links
Other
Nuclear receptor
family TFs
Other
Drosophila sechellia
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
kni
Drosophila melanogaster
FBgn0001320
D
0.989
kni
Drosophila virilis
FBgn0013118
I
0.989
kni
Drosophila simulans
FBgn0044187
I
0.989
GA18381
Drosophila pseudoobscura
FBgn0078384
I
0.989
GF24121
Drosophila ananassae
FBgn0101115
I
0.989
GG13292
Drosophila erecta
FBgn0105564
I
0.989
GH16981
Drosophila grimshawi
FBgn0124452
I
0.989
GI11896
Drosophila mojavensis
FBgn0134654
I
0.989
GL12762
Drosophila persimilis
FBgn0150368
I
0.989
GK10545
Drosophila willistoni
FBgn0212560
I
0.989
GE22389
Drosophila yakuba
FBgn0239612
I
0.989
LCUP004920
Lucilia cuprina
LCUP004920
I
0.988
MDOA012160
Musca domestica
MDOA012160
I
0.988
DAPPUDRAFT_290668
Daphnia pulex
DAPPUDRAFT_290668
I
0.984
AAEL011231
Aedes aegypti
AAEL011231
I
0.983
AGAP010438
Anopheles gambiae
AGAP010438
D
0.983
GB48727
Apis mellifera
GB48727
I
0.983
TC003413
Tribolium castaneum
TC003413
I
0.983
LCUP004922
Lucilia cuprina
LCUP004922
I
0.983
LDEC003050
Leptinotarsa decemlineata
LDEC003050
I
0.983
AALB007603
Anopheles albimanus
AALB007603
I
0.983
AARA005929
Anopheles arabiensis
AARA005929
I
0.983
AATE013762
Anopheles atroparvus
AATE013762
I
0.983
ACUA011505
Anopheles culicifacies
ACUA011505
I
0.983
ADIR005732
Anopheles dirus
ADIR005732
I
0.983
AEPI004043
Anopheles epiroticus
AEPI004043
I
0.983
AFAF014433
Anopheles farauti
AFAF014433
I
0.983
AFUN003486
Anopheles funestus
AFUN003486
I
0.983
AMEM014965
Anopheles merus
AMEM014965
I
0.983
AMIN004996
Anopheles minimus
AMIN004996
I
0.983
AQUA005997
Anopheles quadriannulatus
AQUA005997
I
0.983
ASIS019127
Anopheles sinensis
ASIS019127
I
0.983
MDOA008593
Musca domestica
MDOA008593
I
0.983
PPAI002202
Phlebotomus papatasi
PPAI002202
I
0.983
Hsal_02927--XP_395932.2_APIME
Harpegnathos saltator
Hsal_02927--XP_395932.2_APIME
I
0.982
HHAL001315-PA
Halyomorpha halys
HHAL001315-PA
I
0.982
knrl
Drosophila melanogaster
FBgn0001323
D
0.981
GF24122
Drosophila ananassae
FBgn0101116
I
0.981
GG13294
Drosophila erecta
FBgn0105566
I
0.981
GH16982
Drosophila grimshawi
FBgn0124453
I
0.981
GI11900
Drosophila mojavensis
FBgn0134658
I
0.981
GM22199
Drosophila sechellia
FBgn0177069
I
0.981
GD12173
Drosophila simulans
FBgn0183909
I
0.981
GJ13774
Drosophila virilis
FBgn0200993
I
0.981
GK10566
Drosophila willistoni
FBgn0212581
I
0.981
GE22392
Drosophila yakuba
FBgn0239615
I
0.981
GA18413
Drosophila pseudoobscura
FBgn0078415
I
0.979
KGM_10290
Danaus plexippus
KGM_10290
I
0.979
Cflo_03607--XP_395932.2_APIME
Camponotus floridanus
Cflo_03607--XP_395932.2_APIME
I
0.979
HMEL010451
Heliconius melpomene
HMEL010451
I
0.978
ACYPI066036
Acyrthosiphon pisum
ACYPI066036
I
0.976
ACYPI48166
Acyrthosiphon pisum
ACYPI48166
I
0.976
ACYPI56791
Acyrthosiphon pisum
ACYPI56791
I
0.976
L798_11128
Zootermopsis nevadensis
L798_11128
I
0.976
RPRC003216
Rhodnius prolixus
RPRC003216
I
0.976
SINV19531
Solenopsis invicta
SINV19531
I
0.976
CLEC007515
Cimex lectularius
CLEC007515
I
0.976
CLEC025065
Cimex lectularius
CLEC025065
I
0.976
AGAP028221
Anopheles gambiae
AGAP028221
I
0.975
KGM_21348
Danaus plexippus
KGM_21348
I
0.975
TC003409
Tribolium castaneum
TC003409
I
0.975
ACEP13260
Atta cephalotes
ACEP13260
I
0.974
PHUM470190
Pediculus humanus
PHUM470190
I
0.974
ACEP12797
Atta cephalotes
ACEP12797
I
0.971
DAPPUDRAFT_290673
Daphnia pulex
DAPPUDRAFT_290673
I
0.971
GB51231
Apis mellifera
GB51231
I
0.971
NV16468
Nasonia vitripennis
NV16468
I
0.971
SINV19432
Solenopsis invicta
SINV19432
I
0.971
SMAR012614
Strigamia maritima
SMAR012614
I
0.971
Cflo_03603--XP_001120531.1_APIME
Camponotus floridanus
Cflo_03603--XP_001120531.1_APIME
I
0.971
Hsal_02936--XP_001120531.1_APIME
Harpegnathos saltator
Hsal_02936--XP_001120531.1_APIME
I
0.971
LCUP004919
Lucilia cuprina
LCUP004919
I
0.971
MDOA002495
Musca domestica
MDOA002495
I
0.971
PHUM468660
Pediculus humanus
PHUM468660
I
0.967
Hsal_02933--XP_001120662.1_APIME
Harpegnathos saltator
Hsal_02933--XP_001120662.1_APIME
I
0.964
tetur34g00430
Tetranychus urticae
tetur34g00430
I
0.962
eg
Drosophila melanogaster
FBgn0000560
D
0.958
GA20312
Drosophila pseudoobscura
FBgn0080307
I
0.958
GF25170
Drosophila ananassae
FBgn0102162
I
0.958
GG16225
Drosophila erecta
FBgn0108460
I
0.958
GH16373
Drosophila grimshawi
FBgn0123844
I
0.958
GI11566
Drosophila mojavensis
FBgn0134326
I
0.958
GL24862
Drosophila persimilis
FBgn0162450
I
0.958
GD15001
Drosophila simulans
FBgn0186673
I
0.958
GK17344
Drosophila willistoni
FBgn0219343
I
0.958
GE19793
Drosophila yakuba
FBgn0237126
I
0.958
GE23274
Drosophila yakuba
FBgn0240471
I
0.958
GJ11245
Drosophila virilis
FBgn0198506
I
0.955
GL12764
Drosophila persimilis
FBgn0150370
I
0.946
GB52331
Apis mellifera
GB52331
I
0.920
nRc.2.0.1.g43935
Romanomermis culicivorax
nRc.2.0.1.g43935
I
0.892
HDID_0000406601
Hymenolepis diminuta
HDID_0000406601
I
0.789
HNAJ_0001369901
Hymenolepis nana
HNAJ_0001369901
I
0.789