LotgiG137595 (Lottia gigantea)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 LotgiG137595 T305725_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.988 0.900
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.988 0.900
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.977 0.829
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.977 0.829
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.977 0.829
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.977 0.814
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.974 0.814
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.969 0.814
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.964 0.814
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP137595 Nuclear receptor 8 78

Links

Other Nuclear receptor family TFs
Other Lottia gigantea TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0000075001 Anisakis simplex ASIM_0000075001 N
36550 Aureococcus anophagefferens 36550 N
fgenesh1_pg.6__126 Bigelowiella natans fgenesh1_pg.6__126 N
yakG000714 Bos grunniens yakG000714 N
CaO19.8030 Candida albicans CaO19.8030 N
CaO19.400 Candida albicans CaO19.400 N
ubtfl Danio rerio ENSDARG00000038780 N
ENSGMOG00000009475 Gadus morhua ENSGMOG00000009475 N
ENSGALG00000027670 Gallus gallus ENSGALG00000027670 N
ubtfl Gasterosteus aculeatus ENSGACG00000001504 N
GPLIN_000530400 Globodera pallida GPLIN_000530400 N
ENSLACG00000008118 Latimeria chalumnae ENSLACG00000008118 N
ENSLOCG00000010224 Lepisosteus oculatus ENSLOCG00000010224 N
ENSMGAG00000005096 Meleagris gallopavo ENSMGAG00000005096 N
GNLVRS01_PISO0E10740g Millerozyma farinosa GNLVRS01_PISO0E10740g N
GNLVRS01_PISO0F12105g Millerozyma farinosa GNLVRS01_PISO0F12105g N
fgeneshHS_pg.scaffold_50000080 Naegleria gruberi fgeneshHS_pg.scaffold_50000080 N
ENSONIG00000014037 Oreochromis niloticus ENSONIG00000014037 N
ENSPFOG00000010734 Poecilia formosa ENSPFOG00000010734 N
ubtfl Takifugu rubripes ENSTRUG00000009527 N
ubtfl Tetraodon nigroviridis ENSTNIG00000003066 N
TCNE_0000669501 Toxocara canis TCNE_0000669501 N
1715211A Xenopus laevis 1715211A N
ubtf.L Xenopus laevis XB-GENE-6254049 N
ENSXMAG00000012822 Xiphophorus maculatus ENSXMAG00000012822 N