CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAR006023
(
Strigamia maritima
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
SMAR006023
T305991_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr83
M06434_2.00
Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY
B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436
0.841
0.686
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMAR006023-PA
Nuclear receptor
23
93
VECKVCGDKSYGKHYGVFCCDGCSCFFKRSIRKKIVFACINGKYSCVVDKARRNWCPCCRLQKCLAANMNS
Links
Other
Nuclear receptor
family TFs
Other
Strigamia maritima
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG132791
Lottia gigantea
LotgiG132791
I
0.989
SPU_012586
Strongylocentrotus purpuratus
SPU_012586
I
0.988
tetur01g07700
Tetranychus urticae
tetur01g07700
I
0.987
ACYPI48102
Acyrthosiphon pisum
ACYPI48102
I
0.981
CBG09846
Caenorhabditis briggsae
CBG09846
I
0.981
CRE25188
Caenorhabditis remanei
CRE25188
I
0.981
Sakowv30002570m.g
Saccoglossus kowalevskii
Sakowv30002570m.g
I
0.980
Ocbimv22005486m.g
Octopus bimaculoides
Ocbimv22005486m.g
I
0.978
ISCW008659
Ixodes scapularis
ISCW008659
I
0.977
HelroG148423
Helobdella robusta
HelroG148423
I
0.976
HPLM_0002159101
Haemonchus placei
HPLM_0002159101
I
0.976
NV10871
Nasonia vitripennis
NV10871
I
0.970
L596_g19535
Steinernema carpocapsae
L596_g19535
N
0.965
L889_g32531
Steinernema feltiae
L889_g32531
I
0.965
L892_g29081
Steinernema scapterisci
L892_g29081
N
0.965
CBN10661
Caenorhabditis brenneri
CBN10661
I
0.962
nhr-239
Caenorhabditis elegans
WBGene00021848
I
0.962
L798_08383
Zootermopsis nevadensis
L798_08383
I
0.960
TC010460
Tribolium castaneum
TC010460
I
0.958
ACAC_0001082701
Angiostrongylus cantonensis
ACAC_0001082701
I
0.955
ACOC_0001282001
Angiostrongylus costaricensis
ACOC_0001282001
I
0.955
CapteG177303
Capitella teleta
CapteG177303
I
0.953
RSKR_0000433000
Rhabditophanes kr3021
RSKR_0000433000
I
0.949
Hsal_03084--XP_001121181.1_APIME
Harpegnathos saltator
Hsal_03084--XP_001121181.1_APIME
I
0.940
SMUV_0000977701
Syphacia muris
SMUV_0000977701
N
0.938
BXY_1663900
Bursaphelenchus xylophilus
BXY_1663900
N
0.929
PTRK_0000986400
Parastrongyloides trichosuri
PTRK_0000986400
N
0.906
SPAL_0001030000
Strongyloides papillosus
SPAL_0001030000
N
0.906
SSTP_0000371600
Strongyloides stercoralis
SSTP_0000371600
N
0.906
AATE004130
Anopheles atroparvus
AATE004130
I
0.897
AMAM005986
Anopheles maculatus
AMAM005986
I
0.896
ASTEI03427
Anopheles stephensi
ASTEI03427
I
0.896
AGAP002234
Anopheles gambiae
AGAP002234
I
0.895
AARA006703
Anopheles arabiensis
AARA006703
I
0.895
AEPI004731
Anopheles epiroticus
AEPI004731
I
0.895
AMEC011506
Anopheles melas
AMEC011506
I
0.895
AMEM012481
Anopheles merus
AMEM012481
I
0.895
AQUA004261
Anopheles quadriannulatus
AQUA004261
I
0.895
AALB009657
Anopheles albimanus
AALB009657
I
0.893
CpipJ_CPIJ015933
Culex pipiens
CpipJ_CPIJ015933
I
0.892
CPIJ015933
Culex quinquefasciatus
CPIJ015933
I
0.892
AFUN005541
Anopheles funestus
AFUN005541
I
0.892
AMIN000835
Anopheles minimus
AMIN000835
I
0.892
HR83
Aedes aegypti
AAEL007350
I
0.888
SVE_0494600
Strongyloides venezuelensis
SVE_0494600
N
0.887
GI24589
Drosophila mojavensis
FBgn0147311
I
0.847
GE10213
Drosophila yakuba
FBgn0228087
I
0.846
GJ22654
Drosophila virilis
FBgn0209758
I
0.843
Hr83
Drosophila melanogaster
FBgn0037436
D
0.841
GG13368
Drosophila erecta
FBgn0105640
I
0.841
GM10889
Drosophila sechellia
FBgn0165835
I
0.841
GD19868
Drosophila simulans
FBgn0191357
I
0.841
LCUP007875
Lucilia cuprina
LCUP007875
I
0.830
MDOA009347
Musca domestica
MDOA009347
I
0.830
GF16659
Drosophila ananassae
FBgn0093680
I
0.817
GH18089
Drosophila grimshawi
FBgn0125557
I
0.817
GA10225
Drosophila pseudoobscura
FBgn0070284
I
0.809
GL22067
Drosophila persimilis
FBgn0159659
I
0.809
GK13826
Drosophila willistoni
FBgn0215834
I
0.809
BGLB014038
Biomphalaria glabrata
BGLB014038
N
0.808