CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc02822
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc02822
T307347_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc02822
Nuclear receptor
566
644
KKCKVCECKENVCFHYGVCTCRACGAFFRRYLENEKKSKYNICKCSHKQMLLKESKIQRNWEKCKKCRLDKCFSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf08516-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf08516-augustus-gene-0.5
N
0.995
maker-nMf.1.1.scaf03855-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03855-augustus-gene-0.7
N
0.992
Minc05938
Meloidogyne incognita
Minc05938
N
0.985
Minc11361
Meloidogyne incognita
Minc11361
N
0.985
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
N
0.985
Minc04628
Meloidogyne incognita
Minc04628
N
0.979
Minc04734
Meloidogyne incognita
Minc04734
N
0.974
MhA1_Contig311.frz3.gene3
Meloidogyne hapla
MhA1_Contig311.frz3.gene3
N
0.973
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
N
0.969
Minc03113
Meloidogyne incognita
Minc03113
N
0.965
Minc05939
Meloidogyne incognita
Minc05939
N
0.965
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
N
0.965
Minc11362
Meloidogyne incognita
Minc11362
N
0.957
Minc05946
Meloidogyne incognita
Minc05946
N
0.953
Minc05944
Meloidogyne incognita
Minc05944
N
0.942
Minc03951
Meloidogyne incognita
Minc03951
N
0.937
genemark-nMf.1.1.scaf00124-processed-gene-0.5
Meloidogyne floridensis
genemark-nMf.1.1.scaf00124-processed-gene-0.5
N
0.912
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
N
0.908
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
0.897
Minc05953
Meloidogyne incognita
Minc05953
N
0.895
Minc03116
Meloidogyne incognita
Minc03116
N
0.888
Minc03122
Meloidogyne incognita
Minc03122
N
0.878
Minc05948
Meloidogyne incognita
Minc05948
N
0.878
Minc06648
Meloidogyne incognita
Minc06648
N
0.878
Minc11357
Meloidogyne incognita
Minc11357
N
0.878
Minc18240
Meloidogyne incognita
Minc18240
N
0.872
Minc05955
Meloidogyne incognita
Minc05955
N
0.871
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
0.868
Minc06656
Meloidogyne incognita
Minc06656
N
0.864
Minc11359
Meloidogyne incognita
Minc11359
N
0.855
Minc17472
Meloidogyne incognita
Minc17472
N
0.851
Minc04767
Meloidogyne incognita
Minc04767
N
0.832
Minc03125
Meloidogyne incognita
Minc03125
N
0.789
Minc03124
Meloidogyne incognita
Minc03124
N
0.772
Minc03112
Meloidogyne incognita
Minc03112
N
0.761