CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc05941
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc05941
T307371_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc05941
Nuclear receptor
7
78
KKCKVCGTKEHVLFHYGVCSCRACGSFFRRYLDHENQWKYNLCKCSEKNFDEESQQDLAKCKKCRLGLKKRK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc11359
Meloidogyne incognita
Minc11359
N
0.969
Minc03112
Meloidogyne incognita
Minc03112
N
0.947
Minc06656
Meloidogyne incognita
Minc06656
N
0.945
Minc03124
Meloidogyne incognita
Minc03124
N
0.895
Minc05946
Meloidogyne incognita
Minc05946
N
0.879
Minc03116
Meloidogyne incognita
Minc03116
N
0.804
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
0.802
Minc05955
Meloidogyne incognita
Minc05955
N
0.796
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
N
0.790
Minc03113
Meloidogyne incognita
Minc03113
N
0.776
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
N
0.776
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
0.774
Minc05939
Meloidogyne incognita
Minc05939
N
0.772
Minc06648
Meloidogyne incognita
Minc06648
N
0.769
Minc18240
Meloidogyne incognita
Minc18240
N
0.752