CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AARA003887
(
Anopheles arabiensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
AARA003887
T307478_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.988
0.957
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.988
0.957
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.977
0.829
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.977
0.829
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.977
0.829
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.977
0.814
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.973
0.814
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.969
0.814
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN
NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.963
0.814
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AARA003887-PA
Nuclear receptor
106
176
LICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGSCTVDKAHRNQCQACRLKKCLTMGMNK
Links
Other
Nuclear receptor
family TFs
Other
Anopheles arabiensis
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000001555
Ailuropoda melanoleuca
ENSAMEG00000001555
I
ENSAMEG00000012855
Ailuropoda melanoleuca
ENSAMEG00000012855
I
ELK1
Anolis carolinensis
ENSACAG00000004726
N
ADAC007714
Anopheles darlingi
ADAC007714
N
AMEC020939
Anopheles melas
AMEC020939
N
ENSAMXG00000017384
Astyanax mexicanus
ENSAMXG00000017384
I
ENSP00000366184-D1
Bos grunniens
ENSP00000366184-D1
I
ELK1
Bos taurus
ENSBTAG00000015817
I
e_gw.87.93.1
Branchiostoma floridae
e_gw.87.93.1
N
Brh_R005989
Buceros rhinoceros
Brh_R005989
N
ELK1
Callithrix jacchus
ENSCJAG00000034978
I
ELK1
Canis familiaris
ENSCAFG00000015178
I
ELK4
Canis familiaris
ENSCAFG00000010144
I
ELK1
Cavia porcellus
ENSCPOG00000009149
I
ENSCSAG00000009341
Chlorocebus sabaeus
ENSCSAG00000009341
I
elk1
Danio rerio
ENSDARG00000078066
I
ELK1
Dasypus novemcinctus
ENSDNOG00000040701
I
ELK1
Echinops telfairi
ENSETEG00000007733
I
EVEC_0001289401
Enterobius vermicularis
EVEC_0001289401
N
ELK1
Equus caballus
ENSECAG00000008421
I
ELK1
Erinaceus europaeus
ENSEEUG00000003905
I
ELK1
Felis catus
ENSFCAG00000008192
I
ELK4
Felis catus
ENSFCAG00000006723
I
ELK1
Gorilla gorilla
ENSGGOG00000008714
I
HelroG169427
Helobdella robusta
HelroG169427
N
ELK1
Homo sapiens
ENSG00000126767
D
ENSSTOG00000009932
Ictidomys tridecemlineatus
ENSSTOG00000009932
I
ENSLOCG00000014572
Lepisosteus oculatus
ENSLOCG00000014572
I
ELK1
Loxodonta africana
ENSLAFG00000015524
I
ELK4
Loxodonta africana
ENSLAFG00000016043
I
ENSMMUG00000032584
Macaca mulatta
ENSMMUG00000032584
I
ENSMMUG00000014840
Macaca mulatta
ENSMMUG00000014840
I
ENSMMUG00000019420
Macaca mulatta
ENSMMUG00000019420
I
ENSMEUG00000002933
Macropus eugenii
ENSMEUG00000002933
I
ELK1
Microcebus murinus
ENSMICG00000016244
I
ENSMODG00000010777
Monodelphis domestica
ENSMODG00000010777
N
ENSMPUG00000011926
Mustela putorius furo
ENSMPUG00000011926
I
ENSMPUG00000013401
Mustela putorius furo
ENSMPUG00000013401
I
Elk1
Mus musculus
ENSMUSG00000009406
D
Myotis_brandtii_Etv5_10014999
Myotis brandtii
Myotis_brandtii_Etv5_10014999
N
Myotis_brandtii_Elf3_10008141
Myotis brandtii
Myotis_brandtii_Elf3_10008141
N
Myotis_brandtii_ELK1_10006083
Myotis brandtii
Myotis_brandtii_ELK1_10006083
I
Myotis_brandtii_ELK3_10025590
Myotis brandtii
Myotis_brandtii_ELK3_10025590
I
Myotis_brandtii_ETV4_10015278
Myotis brandtii
Myotis_brandtii_ETV4_10015278
I
ELK1
Myotis lucifugus
ENSMLUG00000001776
I
ENSNLEG00000003420
Nomascus leucogenys
ENSNLEG00000003420
I
ELK1
Ochotona princeps
ENSOPRG00000011603
I
Ogr11326
Ophisaurus gracilis
Ogr11326
I
Ogr09552
Ophisaurus gracilis
Ogr09552
N
ENSONIG00000014594
Oreochromis niloticus
ENSONIG00000014594
I
ELK1
Oryctolagus cuniculus
ENSOCUG00000010521
I
ELK1
Otolemur garnettii
ENSOGAG00000011608
I
ENSOARG00000012819
Ovis aries
ENSOARG00000012819
I
ELK1
Pan troglodytes
ENSPTRG00000021850
I
ENSPPYG00000020299
Pongo abelii
ENSPPYG00000020299
I
scaffold24-EXSNAP2012.76
Pristionchus exspectatus
scaffold24-EXSNAP2012.76
N
PPA28920
Pristionchus pacificus
PPA28920
N
PPA20533
Pristionchus pacificus
PPA20533
N
ELK1
Procavia capensis
ENSPCAG00000006012
I
PXEA_0000424301
Protopolystoma xenopodis
PXEA_0000424301
N
PXEA_0002147501
Protopolystoma xenopodis
PXEA_0002147501
N
ELK1
Pteropus vampyrus
ENSPVAG00000005327
I
Elk1
Rattus norvegicus
ENSRNOG00000010171
I
nRc.2.0.1.g08949
Romanomermis culicivorax
nRc.2.0.1.g08949
N
ELK1
Sorex araneus
ENSSARG00000007914
I
SVUK_0000970801
Strongylus vulgaris
SVUK_0000970801
N
ELK1
Sus scrofa
ENSSSCG00000012279
I
ENSSSCG00000026821
Sus scrofa
ENSSSCG00000026821
N
elk1
Takifugu rubripes
ENSTRUG00000012310
I
ENSTRUG00000007244
Takifugu rubripes
ENSTRUG00000007244
I
ENSTSYG00000007667
Tarsius syrichta
ENSTSYG00000007667
I
ELK1
Tupaia belangeri
ENSTBEG00000000778
N
elk1.S
Xenopus laevis
XB-GENE-5992136
I
elk1
Xenopus tropicalis
XB-GENE-5992134
I
ENSXMAG00000017942
Xiphophorus maculatus
ENSXMAG00000017942
N
ENSXMAG00000017105
Xiphophorus maculatus
ENSXMAG00000017105
N