CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000009401
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0000009401
T307938_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.753
0.794
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.753
0.778
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000009401-mRNA-1
Nuclear receptor
7
70
YDTACSLDSILACNGCSGFFKRSVRRRLIYRCQAGTGSCVVDKAHRNQCQACRLKKCLNKGMNK
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_05086
Wuchereria bancrofti
WUBG_05086
I
0.839
TELCIR_21617
Teladorsagia circumcincta
TELCIR_21617
I
0.839
ISCW019467
Ixodes scapularis
ISCW019467
I
0.804
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
I
0.796
ENSPFOG00000006516
Poecilia formosa
ENSPFOG00000006516
I
0.773
nr2e3
Oryzias latipes
ENSORLG00000007175
I
0.772
ENSXMAG00000015842
Xiphophorus maculatus
ENSXMAG00000015842
I
0.772
DAPPUDRAFT_106791
Daphnia pulex
DAPPUDRAFT_106791
I
0.768
ACYPI007601
Acyrthosiphon pisum
ACYPI007601
I
0.757
ADAC006988
Anopheles darlingi
ADAC006988
I
0.757
AALB001133
Anopheles albimanus
AALB001133
I
0.757
AARA003887
Anopheles arabiensis
AARA003887
I
0.757
AATE003142
Anopheles atroparvus
AATE003142
I
0.757
ACOM026748
Anopheles coluzzii
ACOM026748
I
0.757
AEPI011067
Anopheles epiroticus
AEPI011067
I
0.757
AFAF011447
Anopheles farauti
AFAF011447
I
0.757
AMEM000983
Anopheles merus
AMEM000983
I
0.757
ENSMEUG00000016597
Macropus eugenii
ENSMEUG00000016597
I
0.755
NR2E3
Monodelphis domestica
ENSMODG00000001949
I
0.755
AAEL007190
Aedes aegypti
AAEL007190
I
0.754
CGI_10007932
Crassostrea gigas
CGI_10007932
I
0.753
NR2E3
Anolis carolinensis
ENSACAG00000011910
I
0.753
ENSAMXG00000017872
Astyanax mexicanus
ENSAMXG00000017872
I
0.753
nr2e3
Danio rerio
ENSDARG00000045904
I
0.753
NR2E3
Gasterosteus aculeatus
ENSGACG00000017060
I
0.753
ENSGMOG00000019194
Gadus morhua
ENSGMOG00000019194
I
0.753
ENSLACG00000022378
Latimeria chalumnae
ENSLACG00000022378
I
0.753
ENSLOCG00000014973
Lepisosteus oculatus
ENSLOCG00000014973
I
0.753
ENSONIG00000007109
Oreochromis niloticus
ENSONIG00000007109
I
0.753
NR2E3
Oryzias latipes
ENSORLG00000000011
I
0.753
ENSPFOG00000006106
Poecilia formosa
ENSPFOG00000006106
I
0.753
NR2E3
Takifugu rubripes
ENSTRUG00000015582
I
0.753
ENSXMAG00000010311
Xiphophorus maculatus
ENSXMAG00000010311
I
0.753
Hr51
Drosophila melanogaster
FBgn0034012
D
0.753
GF13031
Drosophila ananassae
FBgn0090064
I
0.753
GH20426
Drosophila grimshawi
FBgn0127889
I
0.753
GI19610
Drosophila mojavensis
FBgn0142347
I
0.753
GL17752
Drosophila persimilis
FBgn0155355
I
0.753
GD11109
Drosophila simulans
FBgn0182865
I
0.753
GJ14974
Drosophila virilis
FBgn0202177
I
0.753
GK20892
Drosophila willistoni
FBgn0222886
I
0.753
GE13645
Drosophila yakuba
FBgn0231304
I
0.753
GA30480
Drosophila pseudoobscura
FBgn0264774
D
0.753
GB49738
Apis mellifera
GB49738
I
0.753
LotgiG137595
Lottia gigantea
LotgiG137595
I
0.753
NV14480
Nasonia vitripennis
NV14480
I
0.753
PHUM039420
Pediculus humanus
PHUM039420
I
0.753
RPRC002557
Rhodnius prolixus
RPRC002557
I
0.753
TC009378
Tribolium castaneum
TC009378
I
0.753
Alligator_sinensis_CCG020979.1
Alligator sinensis
Alligator_sinensis_CCG020979.1
I
0.753
Cmyd_10012017
Chelonia mydas
Cmyd_10012017
I
0.753
Hsal_07902--XP_396999.3_APIME
Harpegnathos saltator
Hsal_07902--XP_396999.3_APIME
I
0.753
Ogr12843
Ophisaurus gracilis
Ogr12843
I
0.753
Pvit_13689
Pogona vitticeps
Pvit_13689
I
0.753
LDEC022044
Leptinotarsa decemlineata
LDEC022044
I
0.753
MDOA010244
Musca domestica
MDOA010244
I
0.753
nr2e3
Xenopus tropicalis
XB-GENE-485801
I
0.752
e_gw.107.44.1
Branchiostoma floridae
e_gw.107.44.1
I
0.748
e_gw.324.28.1
Branchiostoma floridae
e_gw.324.28.1
I
0.748
NR2E3
Loxodonta africana
ENSLAFG00000021987
I
0.747