CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ALUE_0000922801
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0000922801
T307946_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000922801-mRNA-1
Nuclear receptor
9
78
GRCEVCDETSRGYHFGAIVCRACAAFFRRTVALGLKYKCRFDGHCLINKSVRCMCRECRYKRCLEVGMRT
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_02073
Ascaris suum
ASU_02073
N
0.990
TCNE_0000667201
Toxocara canis
TCNE_0000667201
N
0.978
EVEC_0000956701
Enterobius vermicularis
EVEC_0000956701
I
0.904
SMUV_0000241401
Syphacia muris
SMUV_0000241401
I
0.845
SMUV_0000241501
Syphacia muris
SMUV_0000241501
N
0.817
L596_g27594
Steinernema carpocapsae
L596_g27594
N
0.789
L889_g21170
Steinernema feltiae
L889_g21170
N
0.789
L892_g15823
Steinernema scapterisci
L892_g15823
N
0.789
L898_g30838
Steinernema monticolum
L898_g30838
N
0.789
L892_g8137
Steinernema scapterisci
L892_g8137
N
0.763