augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 T308227_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.976 0.773
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.967 0.576
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0-mRNA-1 Nuclear receptor 1 66

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.995
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.990
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.990
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.990
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.990
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.990
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.988
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.987
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.987
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.987
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.987
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.984
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.984
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.984
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.984
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.984
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.983
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.983
L889_g29879 Steinernema feltiae L889_g29879 I 0.983
L889_g7780 Steinernema feltiae L889_g7780 I 0.983
L892_g8671 Steinernema scapterisci L892_g8671 I 0.983
L893_g3010 Steinernema glaseri L893_g3010 I 0.983
L898_g22454 Steinernema monticolum L898_g22454 I 0.983
L898_g2764 Steinernema monticolum L898_g2764 I 0.983
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.983
Bm5319 Brugia malayi Bm5319 I 0.982
LOAG_00300 Loa loa LOAG_00300 I 0.982
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.982
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.982
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.982
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.982
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.982
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.982
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.979
CBG01866 Caenorhabditis briggsae CBG01866 I 0.976
CBN19235 Caenorhabditis brenneri CBN19235 I 0.976
CJA13458 Caenorhabditis japonica CJA13458 I 0.976
CRE03310 Caenorhabditis remanei CRE03310 I 0.976
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.976
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.976
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.976
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.976
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.974
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.974
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.974
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.969
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.969
Bm4980 Brugia malayi Bm4980 I 0.968
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.968
CBG03844 Caenorhabditis briggsae CBG03844 I 0.967
CBN18198 Caenorhabditis brenneri CBN18198 I 0.967
CBN20749 Caenorhabditis brenneri CBN20749 I 0.967
CRE08259 Caenorhabditis remanei CRE08259 I 0.967
LOAG_08615 Loa loa LOAG_08615 I 0.967
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.967
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.967
ASU_03870 Ascaris suum ASU_03870 I 0.967
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.967
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.967
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.967
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.967
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.966
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.966
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.966
ASU_12501 Ascaris suum ASU_12501 I 0.966
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.966
L893_g25227 Steinernema glaseri L893_g25227 I 0.966
NECAME_00872 Necator americanus NECAME_00872 I 0.966
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.966
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.966
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.965
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.964
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.960
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.960
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.958
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.957
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.956
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.956
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.956
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.956
CRE25378 Caenorhabditis remanei CRE25378 I 0.955
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.955
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.954
L893_g13285 Steinernema glaseri L893_g13285 I 0.954
CBG16594 Caenorhabditis briggsae CBG16594 I 0.952
CBN20518 Caenorhabditis brenneri CBN20518 I 0.952
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.951
L889_g17247 Steinernema feltiae L889_g17247 I 0.945
L898_g26357 Steinernema monticolum L898_g26357 I 0.945
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.942
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.942
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.942
L889_g1557 Steinernema feltiae L889_g1557 I 0.938
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.936
L898_g9866 Steinernema monticolum L898_g9866 I 0.936
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.936
PPA21777 Pristionchus pacificus PPA21777 I 0.934
L893_g28857 Steinernema glaseri L893_g28857 I 0.931
NECAME_08394 Necator americanus NECAME_08394 I 0.926
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.925
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.918
CRE00149 Caenorhabditis remanei CRE00149 I 0.917
L893_g3565 Steinernema glaseri L893_g3565 I 0.917
L892_g17612 Steinernema scapterisci L892_g17612 I 0.915
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.914
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.913
L892_g4169 Steinernema scapterisci L892_g4169 I 0.908
CBG10855 Caenorhabditis briggsae CBG10855 I 0.907
CJA08896 Caenorhabditis japonica CJA08896 I 0.907
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.907
CBN24827 Caenorhabditis brenneri CBN24827 I 0.906
CJA00680 Caenorhabditis japonica CJA00680 I 0.906
CBG23319 Caenorhabditis briggsae CBG23319 I 0.897
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.894
L889_g1891 Steinernema feltiae L889_g1891 I 0.890
CRE26981 Caenorhabditis remanei CRE26981 I 0.885
ASU_10584 Ascaris suum ASU_10584 I 0.883
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.883
L889_g22901 Steinernema feltiae L889_g22901 I 0.883
L892_g5079 Steinernema scapterisci L892_g5079 I 0.883
L893_g15276 Steinernema glaseri L893_g15276 I 0.883
L898_g8573 Steinernema monticolum L898_g8573 I 0.883
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.883
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.880
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.880
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.879
CBG10857 Caenorhabditis briggsae CBG10857 I 0.875
CRE00606 Caenorhabditis remanei CRE00606 I 0.875
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.875
PPA06637 Pristionchus pacificus PPA06637 I 0.873
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.872
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.870
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.868
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.860
ASU_03657 Ascaris suum ASU_03657 I 0.860
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.860
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.860
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.858
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.852
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.850
PPA22443 Pristionchus pacificus PPA22443 I 0.847
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.847
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.847
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.847
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.847
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.847
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.847
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.847
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.847
CBG23318 Caenorhabditis briggsae CBG23318 I 0.845
CRE26982 Caenorhabditis remanei CRE26982 I 0.845
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.845
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.839
CBN30215 Caenorhabditis brenneri CBN30215 I 0.833
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.831
CJA01292 Caenorhabditis japonica CJA01292 I 0.830
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.830
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.828
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.825
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.824
ASU_02770 Ascaris suum ASU_02770 I 0.824
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.824
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.824
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.824
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.824
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.824
LOAG_08636 Loa loa LOAG_08636 I 0.822
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.822
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.822
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.822
nRc.2.0.1.g16639 Romanomermis culicivorax nRc.2.0.1.g16639 I 0.822
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.820
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.820
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.820
CBN18824 Caenorhabditis brenneri CBN18824 I 0.818
CBN19472 Caenorhabditis brenneri CBN19472 I 0.818
LOAG_16377 Loa loa LOAG_16377 I 0.818
ASU_13587 Ascaris suum ASU_13587 I 0.818
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.818
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.814
PPA16374 Pristionchus pacificus PPA16374 I 0.813
CBG14485 Caenorhabditis briggsae CBG14485 I 0.812
CBN11572 Caenorhabditis brenneri CBN11572 I 0.812
CJA16040 Caenorhabditis japonica CJA16040 I 0.812
CRE00809 Caenorhabditis remanei CRE00809 I 0.812
CRE30787 Caenorhabditis remanei CRE30787 I 0.812
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.812
CBN15481 Caenorhabditis brenneri CBN15481 I 0.811
CBN28528 Caenorhabditis brenneri CBN28528 I 0.811
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.810
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.810
EFV54558 Trichinella spiralis EFV54558 I 0.806
D917_06779 Trichinella nativa D917_06779 I 0.806
CBG04204 Caenorhabditis briggsae CBG04204 I 0.799
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I 0.799
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.798
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.796
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.795
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.795
NECAME_11999 Necator americanus NECAME_11999 I 0.795
L893_g22683 Steinernema glaseri L893_g22683 I 0.794
L889_g8914 Steinernema feltiae L889_g8914 I 0.793
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.791
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.790
L889_g11570 Steinernema feltiae L889_g11570 I 0.788
L893_g21283 Steinernema glaseri L893_g21283 I 0.788
L898_g23058 Steinernema monticolum L898_g23058 I 0.788
PPA24481 Pristionchus pacificus PPA24481 I 0.786
L892_g4134 Steinernema scapterisci L892_g4134 I 0.786
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.786
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.784
CRE30089 Caenorhabditis remanei CRE30089 I 0.781
Minc02318 Meloidogyne incognita Minc02318 I 0.780
Minc05752 Meloidogyne incognita Minc05752 I 0.780
CJA37776 Caenorhabditis japonica CJA37776 I 0.779
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.778
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.778
L893_g15045 Steinernema glaseri L893_g15045 I 0.776
RSKR_0000625800 Rhabditophanes kr3021 RSKR_0000625800 I 0.776
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.774
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.774
NBR_0001903201 Nippostrongylus brasiliensis NBR_0001903201 I 0.774
CBG09380 Caenorhabditis briggsae CBG09380 I 0.770
PPA29597 Pristionchus pacificus PPA29597 I 0.770
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.770
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.770
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.769
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.768
Minc13747 Meloidogyne incognita Minc13747 I 0.763
Minc17538 Meloidogyne incognita Minc17538 I 0.763
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.763
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.763
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.763
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.763
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.763
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.763
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.760
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.759
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.757
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I 0.755
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I 0.755
ALUE_0000387101 Ascaris lumbricoides ALUE_0000387101 I 0.753
ASU_00859 Ascaris suum ASU_00859 I 0.753
TCNE_0001304301 Toxocara canis TCNE_0001304301 I 0.753
PTRK_0000862000 Parastrongyloides trichosuri PTRK_0000862000 I 0.749
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.749
SSTP_0001140400 Strongyloides stercoralis SSTP_0001140400 I 0.749
PPA20196 Pristionchus pacificus PPA20196 I 0.748
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.748