GPLIN_000327200 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000327200 T308668_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN

NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.841 0.557
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.788 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000327200 Nuclear receptor 10 79

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.977
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.747
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.746
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.970
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.840
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.840
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.840
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.810
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.874
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.874
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.977
ASU_00971 Ascaris suum ASU_00971 I 0.813
ASU_03870 Ascaris suum ASU_03870 I 0.788
Bm4980 Brugia malayi Bm4980 I 0.768
Bm5457 Brugia malayi Bm5457 I 0.977
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.768
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.977
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.850
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.981
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.791
BXY_1057700 Bursaphelenchus xylophilus BXY_1057700 I 0.812
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.889
CBN00088 Caenorhabditis brenneri CBN00088 I 0.759
CBN04415 Caenorhabditis brenneri CBN04415 I 0.888
CBN05776 Caenorhabditis brenneri CBN05776 I 0.888
CBN08474 Caenorhabditis brenneri CBN08474 I 0.977
CBN11344 Caenorhabditis brenneri CBN11344 I 0.771
CBN14643 Caenorhabditis brenneri CBN14643 I 0.771
CBN18198 Caenorhabditis brenneri CBN18198 I 0.788
CBN20749 Caenorhabditis brenneri CBN20749 I 0.788
CBN21958 Caenorhabditis brenneri CBN21958 I 0.759
CBN28641 Caenorhabditis brenneri CBN28641 I 0.874
CBN32300 Caenorhabditis brenneri CBN32300 I 0.888
CBG03466 Caenorhabditis briggsae CBG03466 I 0.874
CBG03844 Caenorhabditis briggsae CBG03844 I 0.788
CBG03848 Caenorhabditis briggsae CBG03848 I 0.771
CBG03860 Caenorhabditis briggsae CBG03860 I 0.888
CBG04240 Caenorhabditis briggsae CBG04240 I 0.868
CBG13142 Caenorhabditis briggsae CBG13142 I 0.888
CBG14996 Caenorhabditis briggsae CBG14996 I 0.812
CBG14997 Caenorhabditis briggsae CBG14997 I 0.761
CBG22587 Caenorhabditis briggsae CBG22587 I 0.838
CBG22776 Caenorhabditis briggsae CBG22776 I 0.977
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.874
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.977
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.915
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.841
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.788
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.875
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.888
nhr-69 Caenorhabditis elegans WBGene00003659 I 0.771
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.894
CJA02727 Caenorhabditis japonica CJA02727 I 0.887
CJA06107 Caenorhabditis japonica CJA06107 I 0.875
CJA14035 Caenorhabditis japonica CJA14035 I 0.977
CJA14248 Caenorhabditis japonica CJA14248 I 0.823
CJA14599 Caenorhabditis japonica CJA14599 I 0.771
CJA14611 Caenorhabditis japonica CJA14611 I 0.874
CJA19445 Caenorhabditis japonica CJA19445 I 0.888
CRE07033 Caenorhabditis remanei CRE07033 I 0.838
CRE07035 Caenorhabditis remanei CRE07035 I 0.785
CRE08089 Caenorhabditis remanei CRE08089 I 0.771
CRE08259 Caenorhabditis remanei CRE08259 I 0.788
CRE08264 Caenorhabditis remanei CRE08264 I 0.888
CRE09416 Caenorhabditis remanei CRE09416 I 0.801
CRE10779 Caenorhabditis remanei CRE10779 I 0.838
CRE21925 Caenorhabditis remanei CRE21925 I 0.977
CRE22212 Caenorhabditis remanei CRE22212 I 0.813
CRE24933 Caenorhabditis remanei CRE24933 I 0.869
CRE26423 Caenorhabditis remanei CRE26423 I 0.888
CRE29874 Caenorhabditis remanei CRE29874 I 0.874
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.970
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.810
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.874
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.816
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.977
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.768
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.747
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.977
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.813
ENSGMOG00000002967 Gadus morhua ENSGMOG00000002967 I 0.751
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.788
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.874
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.810
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.874
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.840
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.888
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.888
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.970
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.888
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.970
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.898
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.874
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.887
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.977
LOAG_07549 Loa loa LOAG_07549 I 0.977
LOAG_08615 Loa loa LOAG_08615 I 0.789
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.773
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.756
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.979
Minc11307 Meloidogyne incognita Minc11307 I 0.980
NECAME_02375 Necator americanus NECAME_02375 I 0.849
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.849
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.746
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.970
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.977
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.792
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.977
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.792
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.977
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.788
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.790
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.807
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.803
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.890
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.977
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.980
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.806
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.817
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.802
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.748
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.980
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.837
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.807
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.965
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.814
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.749
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.826
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.829
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.931
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.979
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.850
L889_g15424 Steinernema feltiae L889_g15424 I 0.925
L889_g16305 Steinernema feltiae L889_g16305 I 0.829
L889_g17247 Steinernema feltiae L889_g17247 I 0.749
L889_g25097 Steinernema feltiae L889_g25097 I 0.979
L889_g2977 Steinernema feltiae L889_g2977 I 0.814
L889_g31970 Steinernema feltiae L889_g31970 I 0.826
L889_g366 Steinernema feltiae L889_g366 I 0.827
L893_g13285 Steinernema glaseri L893_g13285 I 0.749
L893_g263 Steinernema glaseri L893_g263 I 0.826
L893_g33656 Steinernema glaseri L893_g33656 I 0.925
L893_g5404 Steinernema glaseri L893_g5404 I 0.827
L893_g6023 Steinernema glaseri L893_g6023 I 0.980
L893_g6565 Steinernema glaseri L893_g6565 I 0.829
L898_g11608 Steinernema monticolum L898_g11608 I 0.826
L898_g18440 Steinernema monticolum L898_g18440 I 0.979
L898_g26357 Steinernema monticolum L898_g26357 I 0.749
L898_g32368 Steinernema monticolum L898_g32368 I 0.814
L898_g5338 Steinernema monticolum L898_g5338 I 0.829
L898_g9613 Steinernema monticolum L898_g9613 I 0.924
L892_g17146 Steinernema scapterisci L892_g17146 I 0.829
L892_g17832 Steinernema scapterisci L892_g17832 I 0.850
L892_g186 Steinernema scapterisci L892_g186 I 0.979
L892_g23093 Steinernema scapterisci L892_g23093 I 0.814
L892_g3438 Steinernema scapterisci L892_g3438 I 0.932
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.790
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.791
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.977
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.803
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.790
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.977
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.803
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.790
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.790
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.803
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.977
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.791
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.840
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.813
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.974
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.840
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.977
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.790
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.977