L889_g11570 (Steinernema feltiae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L889_g11570 T309043_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.874 0.514
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.837 0.486
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN

NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.745 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g11570.t1 Nuclear receptor 89 158

Links

Other Nuclear receptor family TFs
Other Steinernema feltiae TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I
NAC047 Arabidopsis thaliana AT3G04070 D
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I
Bo1g152220 Brassica oleracea Bo1g152220 I
Bra031949 Brassica rapa Bra031949 I
Bra040152 Brassica rapa Bra040152 I
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I
Carubv10014000m.g Capsella rubella Carubv10014000m.g I
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I
GLYMA12G22790 Glycine max GLYMA12G22790 I
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I
Lus10003269.g Linum usitatissimum Lus10003269.g I
Lus10006547.g Linum usitatissimum Lus10006547.g I
Lus10042531.g Linum usitatissimum Lus10042531.g I
MDP0000674514 Malus domestica MDP0000674514 I
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I
29950.m001173 Ricinus communis 29950.m001173 I
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I
TCM_026030 Theobroma cacao TCM_026030 I
anac047 Vitis vinifera VIT_08s0007g07670 I