maker-nMf.1.1.scaf08489-snap-gene-0.4 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 maker-nMf.1.1.scaf08489-snap-gene-0.4 T309582_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf08489-snap-gene-0.4-mRNA-1 Nuclear receptor 7 89

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc03116 Meloidogyne incognita Minc03116 N 0.991
Minc06648 Meloidogyne incognita Minc06648 N 0.991
Minc18240 Meloidogyne incognita Minc18240 N 0.990
maker-nMf.1.1.scaf11243-snap-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf11243-snap-gene-0.6 N 0.989
Minc17472 Meloidogyne incognita Minc17472 N 0.987
Minc05953 Meloidogyne incognita Minc05953 N 0.982
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 N 0.982
Minc05955 Meloidogyne incognita Minc05955 N 0.968
genemark-nMf.1.1.scaf00124-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00124-processed-gene-0.5 N 0.963
Minc03951 Meloidogyne incognita Minc03951 N 0.959
Minc04767 Meloidogyne incognita Minc04767 N 0.956
Minc03112 Meloidogyne incognita Minc03112 N 0.954
Minc03124 Meloidogyne incognita Minc03124 N 0.953
Minc05944 Meloidogyne incognita Minc05944 N 0.953
Minc03113 Meloidogyne incognita Minc03113 N 0.952
Minc05939 Meloidogyne incognita Minc05939 N 0.952
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 N 0.952
Minc11362 Meloidogyne incognita Minc11362 N 0.950
Minc03125 Meloidogyne incognita Minc03125 N 0.948
Minc11359 Meloidogyne incognita Minc11359 N 0.937
Minc05938 Meloidogyne incognita Minc05938 N 0.934
Minc11361 Meloidogyne incognita Minc11361 N 0.934
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 N 0.934
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 N 0.920
MhA1_Contig311.frz3.gene3 Meloidogyne hapla MhA1_Contig311.frz3.gene3 N 0.915
Minc03122 Meloidogyne incognita Minc03122 N 0.909
Minc05948 Meloidogyne incognita Minc05948 N 0.909
Minc11357 Meloidogyne incognita Minc11357 N 0.909
Minc06656 Meloidogyne incognita Minc06656 N 0.908
Minc05946 Meloidogyne incognita Minc05946 N 0.905
Minc02822 Meloidogyne incognita Minc02822 N 0.897
maker-nMf.1.1.scaf08516-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08516-augustus-gene-0.5 N 0.897
maker-nMf.1.1.scaf03855-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03855-augustus-gene-0.7 N 0.870
Minc05954 Meloidogyne incognita Minc05954 N 0.832
Minc03121 Meloidogyne incognita Minc03121 N 0.826
Minc05949 Meloidogyne incognita Minc05949 N 0.817
maker-nMf.1.1.scaf04083-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04083-augustus-gene-0.6 N 0.806
Minc05941 Meloidogyne incognita Minc05941 N 0.802
Minc04628 Meloidogyne incognita Minc04628 N 0.798
genemark-nMf.1.1.scaf29840-processed-gene-0.0 Meloidogyne floridensis genemark-nMf.1.1.scaf29840-processed-gene-0.0 N 0.782
Minc04734 Meloidogyne incognita Minc04734 N 0.764
snap_masked-nMf.1.1.scaf05597-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf05597-processed-gene-0.2 N 0.760