maker-nMf.1.1.scaf11243-snap-gene-0.6 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 maker-nMf.1.1.scaf11243-snap-gene-0.6 T309588_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf11243-snap-gene-0.6-mRNA-1 Nuclear receptor 7 89

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc06648 Meloidogyne incognita Minc06648 N 0.992
Minc03116 Meloidogyne incognita Minc03116 N 0.990
maker-nMf.1.1.scaf08489-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf08489-snap-gene-0.4 N 0.989
Minc18240 Meloidogyne incognita Minc18240 N 0.988
Minc17472 Meloidogyne incognita Minc17472 N 0.985
Minc05953 Meloidogyne incognita Minc05953 N 0.984
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 N 0.984
Minc03951 Meloidogyne incognita Minc03951 N 0.952
Minc05955 Meloidogyne incognita Minc05955 N 0.952
genemark-nMf.1.1.scaf00124-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00124-processed-gene-0.5 N 0.952
Minc05939 Meloidogyne incognita Minc05939 N 0.950
Minc03113 Meloidogyne incognita Minc03113 N 0.949
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 N 0.949
Minc04767 Meloidogyne incognita Minc04767 N 0.946
Minc05944 Meloidogyne incognita Minc05944 N 0.945
Minc03112 Meloidogyne incognita Minc03112 N 0.944
Minc11362 Meloidogyne incognita Minc11362 N 0.936
Minc03124 Meloidogyne incognita Minc03124 N 0.935
Minc03125 Meloidogyne incognita Minc03125 N 0.923
Minc11359 Meloidogyne incognita Minc11359 N 0.923
Minc05938 Meloidogyne incognita Minc05938 N 0.914
Minc11361 Meloidogyne incognita Minc11361 N 0.914
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 N 0.914
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 N 0.898
Minc03122 Meloidogyne incognita Minc03122 N 0.895
Minc05948 Meloidogyne incognita Minc05948 N 0.895
Minc11357 Meloidogyne incognita Minc11357 N 0.895
MhA1_Contig311.frz3.gene3 Meloidogyne hapla MhA1_Contig311.frz3.gene3 N 0.895
Minc05946 Meloidogyne incognita Minc05946 N 0.880
Minc06656 Meloidogyne incognita Minc06656 N 0.873
Minc02822 Meloidogyne incognita Minc02822 N 0.868
maker-nMf.1.1.scaf08516-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08516-augustus-gene-0.5 N 0.868
maker-nMf.1.1.scaf03855-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03855-augustus-gene-0.7 N 0.834
Minc05954 Meloidogyne incognita Minc05954 N 0.830
genemark-nMf.1.1.scaf29840-processed-gene-0.0 Meloidogyne floridensis genemark-nMf.1.1.scaf29840-processed-gene-0.0 N 0.782
Minc05941 Meloidogyne incognita Minc05941 N 0.774
snap_masked-nMf.1.1.scaf05597-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf05597-processed-gene-0.2 N 0.760
Minc03121 Meloidogyne incognita Minc03121 N 0.759
Minc04628 Meloidogyne incognita Minc04628 N 0.748
Minc05949 Meloidogyne incognita Minc05949 N 0.748