MhA1_Contig691.frz3.gene13 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig691.frz3.gene13 T309670_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.871 0.571
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.793 0.500
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.757 0.471
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.755 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig691.frz3.gene13 Nuclear receptor 66 135

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N
AT3G19184 Arabidopsis thaliana AT3G19184 N
Bo6g124000 Brassica oleracea Bo6g124000 N
Bra035129 Brassica rapa Bra035129 N
PK25650.1 Cannabis sativa PK25650.1 N
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N
Cla016258 Citrullus lanatus Cla016258 N
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N
Cucsa.219930 Cucumis sativus Cucsa.219930 N
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N
GLYMA06G04200 Glycine max GLYMA06G04200 N
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N
Lus10019870.g Linum usitatissimum Lus10019870.g N
Lus10014044.g Linum usitatissimum Lus10014044.g N
cassava1104.valid.m1 Manihot esculenta cassava1104.valid.m1 N
mgf008645m Mimulus guttatus mgf008645m N
POPTR_0009s10600 Populus trichocarpa POPTR_0009s10600 N
Pm021349 Prunus mume Pm021349 N
29801.m003200 Ricinus communis 29801.m003200 N
SapurV1A.0090s0760 Salix purpurea SapurV1A.0090s0760 N
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N
TCM_007039 Theobroma cacao TCM_007039 N
VIT_03s0063g00620 Vitis vinifera VIT_03s0063g00620 N