CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000843500
(
Parastrongyloides trichosuri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PTRK_0000843500
T310023_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000843500.1
Nuclear receptor
20
87
TNCVICDKPTTCCHYDVISCNGCKTFFRRSIILDKYYVCKQNGQCEVDKRTCCKKCRFDKCLNKGMKP
Links
Other
Nuclear receptor
family TFs
Other
Parastrongyloides trichosuri
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSTP_0000964300
Strongyloides stercoralis
SSTP_0000964300
N
0.894
SPAL_0000136700
Strongyloides papillosus
SPAL_0000136700
N
0.860
SVE_0655700
Strongyloides venezuelensis
SVE_0655700
N
0.852
CBN29725
Caenorhabditis brenneri
CBN29725
I
0.846
CRE27053
Caenorhabditis remanei
CRE27053
I
0.846
L889_g27850
Steinernema feltiae
L889_g27850
I
0.837
L893_g7217
Steinernema glaseri
L893_g7217
I
0.833
L893_g7215
Steinernema glaseri
L893_g7215
N
0.832
L596_g27485
Steinernema carpocapsae
L596_g27485
I
0.813
L892_g17994
Steinernema scapterisci
L892_g17994
I
0.813
PPA29548
Pristionchus pacificus
PPA29548
N
0.799
ASU_02757
Ascaris suum
ASU_02757
N
0.784
ASU_02755
Ascaris suum
ASU_02755
I
0.774
RSKR_0000012800
Rhabditophanes kr3021
RSKR_0000012800
N
0.752
RSKR_0001037200
Rhabditophanes kr3021
RSKR_0001037200
N
0.750