CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0301400
(
Strongyloides venezuelensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SVE_0301400
T310640_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.892
0.614
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.854
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0301400.1
Nuclear receptor
70
139
DKCRVCGDSPARMHYGVPTCFGCKGFFRRTLKRTKDYVCRYQGTCIVDRHERNSCRFCRFKKCLEVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Strongyloides venezuelensis
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
0.994
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
0.994
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
0.994
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
0.989
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
0.989
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
0.986
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
0.984
L596_g25297
Steinernema carpocapsae
L596_g25297
I
0.984
L889_g8361
Steinernema feltiae
L889_g8361
I
0.984
L898_g10316
Steinernema monticolum
L898_g10316
I
0.984
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
0.982
nhr-119
Caenorhabditis elegans
WBGene00003709
I
0.981
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
0.981
CBG19594
Caenorhabditis briggsae
CBG19594
I
0.977
CBN31048
Caenorhabditis brenneri
CBN31048
I
0.977
CRE06661
Caenorhabditis remanei
CRE06661
I
0.977
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
0.977
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
0.977
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
0.977
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
0.977
HCOI00769300
Haemonchus contortus
HCOI00769300
I
0.977
HCOI01406200
Haemonchus contortus
HCOI01406200
I
0.977
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
0.977
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
0.977
NECAME_12696
Necator americanus
NECAME_12696
I
0.977
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
0.977
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
0.977
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
0.977
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
0.976
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
0.968
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.968
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.968
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.968
RSKR_0000868400
Rhabditophanes kr3021
RSKR_0000868400
N
0.966
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.952
PTRK_0000497300
Parastrongyloides trichosuri
PTRK_0000497300
I
0.945
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.943
L889_g5777
Steinernema feltiae
L889_g5777
I
0.937
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
0.936
CBN25890
Caenorhabditis brenneri
CBN25890
N
0.935
EVEC_0000733201
Enterobius vermicularis
EVEC_0000733201
N
0.932
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.930
L893_g29388
Steinernema glaseri
L893_g29388
I
0.930
L898_g24498
Steinernema monticolum
L898_g24498
I
0.930
HCOI00435200
Haemonchus contortus
HCOI00435200
I
0.923
ACAC_0000409401
Angiostrongylus cantonensis
ACAC_0000409401
I
0.917
CBG17744
Caenorhabditis briggsae
CBG17744
I
0.909
DICVIV_11945
Dictyocaulus viviparus
DICVIV_11945
I
0.907
L893_g32432
Steinernema glaseri
L893_g32432
I
0.907
EVEC_0001115901
Enterobius vermicularis
EVEC_0001115901
I
0.904
SMUV_0000212501
Syphacia muris
SMUV_0000212501
I
0.904
CBN18797
Caenorhabditis brenneri
CBN18797
I
0.903
CBN26258
Caenorhabditis brenneri
CBN26258
I
0.903
L596_g3809
Steinernema carpocapsae
L596_g3809
I
0.899
L889_g8621
Steinernema feltiae
L889_g8621
I
0.899
L893_g27201
Steinernema glaseri
L893_g27201
I
0.899
L898_g2799
Steinernema monticolum
L898_g2799
I
0.899
DME_0000188101
Dracunculus medinensis
DME_0000188101
I
0.894
CBG06052
Caenorhabditis briggsae
CBG06052
I
0.892
CRE12779
Caenorhabditis remanei
CRE12779
I
0.892
nhr-7
Caenorhabditis elegans
WBGene00003606
D
0.892
Bm2389
Brugia malayi
Bm2389
I
0.891
LOAG_01074
Loa loa
LOAG_01074
I
0.891
Ppa-nhr-31
Pristionchus pacificus
PPA24219
I
0.891
ASU_04305
Ascaris suum
ASU_04305
I
0.891
scaffold601-EXSNAP2012.19
Pristionchus exspectatus
scaffold601-EXSNAP2012.19
I
0.891
Minc01725
Meloidogyne incognita
Minc01725
I
0.890
Minc13525
Meloidogyne incognita
Minc13525
I
0.890
maker-nMf.1.1.scaf07948-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf07948-snap-gene-0.4
I
0.890
MhA1_Contig217.frz3.gene7
Meloidogyne hapla
MhA1_Contig217.frz3.gene7
I
0.890
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2
I
0.890
ASU_01199
Ascaris suum
ASU_01199
I
0.889
GPLIN_000669000
Globodera pallida
GPLIN_000669000
I
0.887
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
0.887
CJA08328
Caenorhabditis japonica
CJA08328
I
0.886
BXY_0011200
Bursaphelenchus xylophilus
BXY_0011200
I
0.886
CRE02711
Caenorhabditis remanei
CRE02711
I
0.884
CRE10161
Caenorhabditis remanei
CRE10161
I
0.884
nhr-31
Caenorhabditis elegans
WBGene00003625
I
0.884
nDi.2.2.2.g03563
Dirofilaria immitis
nDi.2.2.2.g03563
I
0.883
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
0.881
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
0.881
HCOI01716000
Haemonchus contortus
HCOI01716000
I
0.881
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
0.881
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
0.881
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
0.881
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
0.881
BXY_0740100
Bursaphelenchus xylophilus
BXY_0740100
I
0.880
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.878
SPAL_0000620000
Strongyloides papillosus
SPAL_0000620000
I
0.878
SSTP_0000662400
Strongyloides stercoralis
SSTP_0000662400
I
0.878
SVE_1965700
Strongyloides venezuelensis
SVE_1965700
I
0.878
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
0.877
L889_g29204
Steinernema feltiae
L889_g29204
I
0.876
L898_g4801
Steinernema monticolum
L898_g4801
I
0.876
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.874
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.874
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.874
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.874
CJA13646
Caenorhabditis japonica
CJA13646
I
0.868
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.868
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.868
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.868
NECAME_05125
Necator americanus
NECAME_05125
I
0.868
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.868
PPA20304
Pristionchus pacificus
PPA20304
I
0.867
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.866
Bm12053
Brugia malayi
Bm12053
I
0.866
Bm4894
Brugia malayi
Bm4894
I
0.866
LOAG_05485
Loa loa
LOAG_05485
I
0.866
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.866
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.866
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.866
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.866
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.866
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.866
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.866
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.866
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.866
PPA21285
Pristionchus pacificus
PPA21285
I
0.865
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.865
Minc15420
Meloidogyne incognita
Minc15420
I
0.864
GPLIN_001106000
Globodera pallida
GPLIN_001106000
I
0.864
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.864
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.863
WBGene00241236
Onchocerca volvulus
WBGene00241236
I
0.859
CBN13729
Caenorhabditis brenneri
CBN13729
I
0.858
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
0.858
nLs.2.1.2.g05858
Litomosoides sigmodontis
nLs.2.1.2.g05858
I
0.856
WUBG_08518
Wuchereria bancrofti
WUBG_08518
I
0.855
Bm14724
Brugia malayi
Bm14724
I
0.855
CBN19233
Caenorhabditis brenneri
CBN19233
I
0.855
LOAG_18352
Loa loa
LOAG_18352
I
0.855
WBGene00241910
Onchocerca volvulus
WBGene00241910
I
0.855
ASU_10946
Ascaris suum
ASU_10946
I
0.855
BTMF_0000273701
Brugia timori
BTMF_0000273701
I
0.855
nAv.1.0.1.g09896
Acanthocheilonema viteae
nAv.1.0.1.g09896
I
0.855
nDi.2.2.2.g05078
Dirofilaria immitis
nDi.2.2.2.g05078
I
0.855
nOo.2.0.1.g05901
Onchocerca ochengi
nOo.2.0.1.g05901
I
0.855
OFLC_0000776201
Onchocerca flexuosa
OFLC_0000776201
I
0.855
TCLT_0000079701
Thelazia callipaeda
TCLT_0000079701
I
0.855
TCNE_0001780601
Toxocara canis
TCNE_0001780601
I
0.855
CBG07552
Caenorhabditis briggsae
CBG07552
I
0.854
CRE15289
Caenorhabditis remanei
CRE15289
I
0.854
nhr-3
Caenorhabditis elegans
WBGene00003602
D
0.854
ANCCAN_18459
Ancylostoma caninum
ANCCAN_18459
I
0.854
HCOI02077900
Haemonchus contortus
HCOI02077900
I
0.854
NECAME_04545
Necator americanus
NECAME_04545
I
0.854
OESDEN_02943
Oesophagostomum dentatum
OESDEN_02943
I
0.854
TELCIR_01879
Teladorsagia circumcincta
TELCIR_01879
I
0.854
L893_g6878
Steinernema glaseri
L893_g6878
I
0.852
SMUV_0000428701
Syphacia muris
SMUV_0000428701
I
0.851
L893_g29555
Steinernema glaseri
L893_g29555
I
0.850
L596_g25666
Steinernema carpocapsae
L596_g25666
I
0.848
L892_g650
Steinernema scapterisci
L892_g650
I
0.848
RSKR_0000832300
Rhabditophanes kr3021
RSKR_0000832300
I
0.845
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.843
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.843
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.840
CJA04720
Caenorhabditis japonica
CJA04720
I
0.840
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.838
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.838
CRE06667
Caenorhabditis remanei
CRE06667
I
0.838
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.838
ASIM_0001589901
Anisakis simplex
ASIM_0001589901
I
0.821
L898_g23965
Steinernema monticolum
L898_g23965
I
0.809
L596_g3812
Steinernema carpocapsae
L596_g3812
I
0.808
L889_g6303
Steinernema feltiae
L889_g6303
I
0.808
L893_g27196
Steinernema glaseri
L893_g27196
I
0.808
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
0.807
L892_g21738
Steinernema scapterisci
L892_g21738
I
0.797
nOo.2.0.1.g02048
Onchocerca ochengi
nOo.2.0.1.g02048
N
0.793
EVEC_0000349901
Enterobius vermicularis
EVEC_0000349901
I
0.783
L898_g14928
Steinernema monticolum
L898_g14928
I
0.759