CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0002110501
(
Nippostrongylus brasiliensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
NBR_0002110501
T312815_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.705
0.705
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.705
0.705
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0002110501-mRNA-1
Paired box
15
92
ASRESQRRRYVENGSIEPGTIGGSKPRVTTPKVVEYIRLLKFSDPGIFSWEIRDRLVNDGICSKDNCPSVSSISRILR
Links
Other
Paired box
family TFs
Other
Nippostrongylus brasiliensis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVUK_0000340101
Strongylus vulgaris
SVUK_0000340101
I
0.865
ACAC_0001249001
Angiostrongylus cantonensis
ACAC_0001249001
I
0.846
ANCCEY_02265
Ancylostoma ceylanicum
ANCCEY_02265
I
0.846
HPLM_0000508801
Haemonchus placei
HPLM_0000508801
I
0.846
TELCIR_14257
Teladorsagia circumcincta
TELCIR_14257
I
0.833
ANCDUO_05898
Ancylostoma duodenale
ANCDUO_05898
I
0.821
CGOC_0001437301
Cylicostephanus goldi
CGOC_0001437301
N
0.821
DICVIV_10778
Dictyocaulus viviparus
DICVIV_10778
I
0.821
HPBE_0001739601
Heligmosomoides bakeri
HPBE_0001739601
I
0.821
NECAME_07382
Necator americanus
NECAME_07382
I
0.743
ACEP27324
Atta cephalotes
ACEP27324
I
0.705
ADAC006866
Anopheles darlingi
ADAC006866
I
0.705
AGAP001493
Anopheles gambiae
AGAP001493
I
0.705
DAPPUDRAFT_307722
Daphnia pulex
DAPPUDRAFT_307722
I
0.705
Poxm
Drosophila melanogaster
FBgn0003129
D
0.705
GA21910
Drosophila pseudoobscura
FBgn0081895
I
0.705
GF16668
Drosophila ananassae
FBgn0093689
I
0.705
GG17455
Drosophila erecta
FBgn0109681
I
0.705
GH17421
Drosophila grimshawi
FBgn0124891
I
0.705
GI22750
Drosophila mojavensis
FBgn0145477
I
0.705
GL24118
Drosophila persimilis
FBgn0161708
I
0.705
GM26349
Drosophila sechellia
FBgn0181202
I
0.705
GJ22751
Drosophila virilis
FBgn0209855
I
0.705
GK14101
Drosophila willistoni
FBgn0216107
I
0.705
GE24855
Drosophila yakuba
FBgn0241954
I
0.705
TC008838
Tribolium castaneum
TC008838
I
0.705
YQE_12494
Dendroctonus ponderosae
YQE_12494
I
0.705
LCUP007799
Lucilia cuprina
LCUP007799
I
0.705
AALB006349
Anopheles albimanus
AALB006349
I
0.705
AARA001070
Anopheles arabiensis
AARA001070
I
0.705
AATE019429
Anopheles atroparvus
AATE019429
I
0.705
ACUA000500
Anopheles culicifacies
ACUA000500
I
0.705
ADIR000995
Anopheles dirus
ADIR000995
I
0.705
AEPI005638
Anopheles epiroticus
AEPI005638
I
0.705
AFAF006072
Anopheles farauti
AFAF006072
I
0.705
AFUN001734
Anopheles funestus
AFUN001734
I
0.705
AMAM000649
Anopheles maculatus
AMAM000649
I
0.705
AMEC017516
Anopheles melas
AMEC017516
I
0.705
AMEM000130
Anopheles merus
AMEM000130
I
0.705
AMIN005066
Anopheles minimus
AMIN005066
I
0.705
AQUA002471
Anopheles quadriannulatus
AQUA002471
I
0.705
ASIS022893
Anopheles sinensis
ASIS022893
I
0.705
ASTEI07741
Anopheles stephensi
ASTEI07741
I
0.705