CRE07418 (Caenorhabditis remanei)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 CRE07418 T313487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CRE07418 Pipsqueak 153 195
CRE07418 Pipsqueak 358 403

Links

Other Pipsqueak family TFs
Other Caenorhabditis remanei TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN10229 Caenorhabditis brenneri CBN10229 N 0.977
CJA11562 Caenorhabditis japonica CJA11562 N 0.977
CBG04528 Caenorhabditis briggsae CBG04528 N 0.966
ANCCAN_11119 Ancylostoma caninum ANCCAN_11119 N 0.851
HCOI01126400 Haemonchus contortus HCOI01126400 N 0.851
HPLM_0001514901 Haemonchus placei HPLM_0001514901 N 0.851
TCLT_0000738501 Thelazia callipaeda TCLT_0000738501 N 0.837
LOAG_18975 Loa loa LOAG_18975 N 0.833
DME_0000703101 Dracunculus medinensis DME_0000703101 N 0.828
PTRK_0000738400 Parastrongyloides trichosuri PTRK_0000738400 N 0.828
SPAL_0001308000 Strongyloides papillosus SPAL_0001308000 N 0.828
SSTP_0000853200 Strongyloides stercoralis SSTP_0000853200 N 0.824
SVE_0358800 Strongyloides venezuelensis SVE_0358800 N 0.824
Bm5461 Brugia malayi Bm5461 N 0.816
WBGene00242326 Onchocerca volvulus WBGene00242326 N 0.816
ASU_08146 Ascaris suum ASU_08146 N 0.816
EEL_0001032101 Elaeophora elaphi EEL_0001032101 N 0.816
nDi.2.2.2.g04953 Dirofilaria immitis nDi.2.2.2.g04953 N 0.816
nLs.2.1.2.g07513 Litomosoides sigmodontis nLs.2.1.2.g07513 N 0.816
nOo.2.0.1.g02662 Onchocerca ochengi nOo.2.0.1.g02662 N 0.816
scaffold10-EXSNAP2012.60 Pristionchus exspectatus scaffold10-EXSNAP2012.60 N 0.805
genemark-nMf.1.1.scaf00700-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf00700-processed-gene-0.2 N 0.800
MhA1_Contig775.frz3.gene10 Meloidogyne hapla MhA1_Contig775.frz3.gene10 N 0.782
RSKR_0000834400 Rhabditophanes kr3021 RSKR_0000834400 N 0.782
OFLC_0001352601 Onchocerca flexuosa OFLC_0001352601 N 0.781