CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRE_0000516501
(
Trichobilharzia regenti
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
TRE_0000516501
T315172_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000516501-mRNA-1
Pipsqueak
75
119
TEAELSAAVKAICFGRLGTRRAASVYGIPRSTLRNKICKLNELKK
Links
Other
Pipsqueak
family TFs
Other
Trichobilharzia regenti
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sjc_0043400
Schistosoma japonicum
Sjc_0043400
N
0.977
D915_08018
Fasciola hepatica
D915_08018
N
0.911
ECPE_0000451001
Echinostoma caproni
ECPE_0000451001
N
0.911
SPER_0002515801
Spirometra erinaceieuropaei
SPER_0002515801
N
0.897
csin109873
Clonorchis sinensis
csin109873
N
0.886
PXEA_0001645901
Protopolystoma xenopodis
PXEA_0001645901
N
0.886
T265_13345
Opisthorchis viverrini
T265_13345
N
0.886
A_01101
Schistosoma haematobium
A_01101
N
0.841
SMRZ_0001491901
Schistosoma margrebowiei
SMRZ_0001491901
N
0.841
SMTD_0002220201
Schistosoma mattheei
SMTD_0002220201
N
0.841
MCOS_0000531201
Mesocestoides corti
MCOS_0000531201
N
0.822
HNAJ_0001032701
Hymenolepis nana
HNAJ_0001032701
N
0.810
TTAC_0000736301
Hydatigera taeniaeformis
TTAC_0000736301
N
0.805
ECANG7_00899
Echinococcus canadensis
ECANG7_00899
N
0.795
EmuJ_000811900
Echinococcus multilocularis
EmuJ_000811900
N
0.795
HmN_000277400
Hymenolepis microstoma
HmN_000277400
N
0.791