CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g065480
(
Brassica oleracea
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04640 (PLATZ)
IPR006734
Bo9g065480
T315262_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g065480.1
PLATZ
133
213
RRSSYHDVIRVSEIQKHLDIFSIQMYVINSAKVVFLNERPQPQPQPQPQPRPAKGVTNACTVCYRALVDDCFRFCSLGCKV
Links
Other
PLATZ
family TFs
Other
Brassica oleracea
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra017531
Brassica rapa
Bra017531
N
0.947
AT4G17900
Arabidopsis thaliana
AT4G17900
N
0.836
Bo1g018010
Brassica oleracea
Bo1g018010
N
0.836
Bo8g049810
Brassica oleracea
Bo8g049810
N
0.822
Al_scaffold_0001_3341
Arabidopsis lyrata
Al_scaffold_0001_3341
N
0.819
AT1G32700
Arabidopsis thaliana
AT1G32700
N
0.819
Bostr.3359s0088
Boechera stricta
Bostr.3359s0088
N
0.819
Cagra.4962s0001
Capsella grandiflora
Cagra.4962s0001
N
0.819
Carubv10009979m.g
Capsella rubella
Carubv10009979m.g
N
0.819
PRUPE_ppa011266mg
Prunus persica
PRUPE_ppa011266mg
N
0.806
Gorai.008G226100
Gossypium raimondii
Gorai.008G226100
N
0.806
POPTR_0003s09160
Populus trichocarpa
POPTR_0003s09160
N
0.792
Pm023220
Prunus mume
Pm023220
N
0.792
Ciclev10012712m.g
Citrus clementina
Ciclev10012712m.g
N
0.792
Gorai.007G032400
Gossypium raimondii
Gorai.007G032400
N
0.792
orange1.1g027730m.g
Citrus sinensis
orange1.1g027730m.g
N
0.792
BGIOSGA005806
Oryza indica
BGIOSGA005806
N
0.778
Bo7g075640
Brassica oleracea
Bo7g075640
N
0.778
Bra025003
Brassica rapa
Bra025003
N
0.778
GLYMA01G02180
Glycine max
GLYMA01G02180
N
0.778
GLYMA09G33770
Glycine max
GLYMA09G33770
N
0.778
GRMZM2G091044
Zea mays
GRMZM2G091044
N
0.778
GSMUA_Achr5G03420_001
Musa acuminata
GSMUA_Achr5G03420_001
N
0.778
GSMUA_Achr5G18120_001
Musa acuminata
GSMUA_Achr5G18120_001
N
0.778
LPERR02G23300
Leersia perrieri
LPERR02G23300
N
0.778
OB02G35810
Oryza brachyantha
OB02G35810
N
0.778
OBART02G28660
Oryza barthii
OBART02G28660
N
0.778
OGLUM02G29250
Oryza glumaepatula
OGLUM02G29250
N
0.778
OLONG_023395
Oryza longistaminata
OLONG_023395
N
0.778
ONIVA02G31400
Oryza nivara
ONIVA02G31400
N
0.778
OPUNC02G26310
Oryza punctata
OPUNC02G26310
N
0.778
ORGLA02G0246600
Oryza glaberrima
ORGLA02G0246600
N
0.778
ORUFI02G30220
Oryza rufipogon
ORUFI02G30220
N
0.778
OS02G0692700
Oryza sativa
OS02G0692700
N
0.778
Sb04g031230
Sorghum bicolor
Sb04g031230
N
0.778
VIT_02s0012g01400
Vitis vinifera
VIT_02s0012g01400
N
0.778
Ca_11505
Cicer arietinum
Ca_11505
N
0.778
Cla016461
Citrullus lanatus
Cla016461
N
0.778
Cucsa.313040
Cucumis sativus
Cucsa.313040
N
0.778
Eucgr.D02206
Eucalyptus grandis
Eucgr.D02206
N
0.778
Eucgr.E00276
Eucalyptus grandis
Eucgr.E00276
N
0.778
gene02186-v1.0-hybrid
Fragaria vesca
gene02186-v1.0-hybrid
N
0.778
Lus10030968.g
Linum usitatissimum
Lus10030968.g
N
0.778
Lus10040082.g
Linum usitatissimum
Lus10040082.g
N
0.778
Pavir.Aa01152
Panicum virgatum
Pavir.Aa01152
N
0.778
Pavir.Ab01769
Panicum virgatum
Pavir.Ab01769
N
0.778
Thhalv10001013m.g
Eutrema salsugineum
Thhalv10001013m.g
N
0.778
Bo7g105550
Brassica oleracea
Bo7g105550
N
0.765
Bra013266
Brassica rapa
Bra013266
N
0.765
GLYMA01G44430
Glycine max
GLYMA01G44430
N
0.764
GLYMA08G36641
Glycine max
GLYMA08G36641
N
0.764
GLYMA11G01100
Glycine max
GLYMA11G01100
N
0.764
GSMUA_Achr2G18160_001
Musa acuminata
GSMUA_Achr2G18160_001
N
0.764
MLOC_63157
Hordeum vulgare
MLOC_63157
N
0.764
MTR_5g007230
Medicago truncatula
MTR_5g007230
N
0.764
MTR_8g066820
Medicago truncatula
MTR_8g066820
N
0.764
Aquca_005_00468
Aquilegia coerulea
Aquca_005_00468
N
0.764
Bra012632
Brassica rapa
Bra012632
N
0.753
fgenesh2_kg.7__2515__AT4G17900.1
Arabidopsis lyrata
fgenesh2_kg.7__2515__AT4G17900.1
N
0.753
Bostr.30275s0258
Boechera stricta
Bostr.30275s0258
N
0.753
Thhalv10026159m.g
Eutrema salsugineum
Thhalv10026159m.g
N
0.753
GLYMA01G11390
Glycine max
GLYMA01G11390
N
0.750
Ciclev10032089m.g
Citrus clementina
Ciclev10032089m.g
N
0.750
Gorai.013G184000
Gossypium raimondii
Gorai.013G184000
N
0.750
Lus10000482.g
Linum usitatissimum
Lus10000482.g
N
0.750
orange1.1g026096m.g
Citrus sinensis
orange1.1g026096m.g
N
0.750
Bra021029
Brassica rapa
Bra021029
N
0.741
Cagra.3356s0083
Capsella grandiflora
Cagra.3356s0083
N
0.741
Carubv10005524m.g
Capsella rubella
Carubv10005524m.g
N
0.741
AMTR_s00002p00211460
Amborella trichopoda
AMTR_s00002p00211460
N
0.736
evm.TU.supercontig_43.104
Carica papaya
evm.TU.supercontig_43.104
N
0.736
Bo8g028900
Brassica oleracea
Bo8g028900
N
0.728
Bra023280
Brassica rapa
Bra023280
N
0.728
Bra035494
Brassica rapa
Bra035494
N
0.728
TCM_015701
Theobroma cacao
TCM_015701
N
0.728
Gorai.003G183000
Gossypium raimondii
Gorai.003G183000
N
0.728
Gorai.004G184500
Gossypium raimondii
Gorai.004G184500
N
0.728
Thhalv10008750m.g
Eutrema salsugineum
Thhalv10008750m.g
N
0.728
AT5G46710
Arabidopsis thaliana
AT5G46710
N
0.726
PGSC0003DMG400009931
Solanum tuberosum
PGSC0003DMG400009931
N
0.722
MDP0000133007
Malus domestica
MDP0000133007
N
0.722
MDP0000133008
Malus domestica
MDP0000133008
N
0.722
MDP0000225862
Malus domestica
MDP0000225862
N
0.722
Bo5g049240
Brassica oleracea
Bo5g049240
N
0.716
PGSC0003DMG400017518
Solanum tuberosum
PGSC0003DMG400017518
N
0.716
mgf006925m
Mimulus guttatus
mgf006925m
N
0.716
Gorai.006G217100
Gossypium raimondii
Gorai.006G217100
N
0.716
Carubv10027053m.g
Capsella rubella
Carubv10027053m.g
N
0.712
MLOC_59330
Hordeum vulgare
MLOC_59330
N
0.708
mgf023930m
Mimulus guttatus
mgf023930m
N
0.708
Lus10000952.g
Linum usitatissimum
Lus10000952.g
N
0.708
Lus10002700.g
Linum usitatissimum
Lus10002700.g
N
0.708
SapurV1A.0226s0270
Salix purpurea
SapurV1A.0226s0270
N
0.708
MTR_5g030130
Medicago truncatula
MTR_5g030130
N
0.704
POPTR_0001s02390
Populus trichocarpa
POPTR_0001s02390
N
0.704
Solyc08g076860.2
Solanum lycopersicum
Solyc08g076860.2
N
0.704
30054.m000824
Ricinus communis
30054.m000824
N
0.704
cassava2216.valid.m1
Manihot esculenta
cassava2216.valid.m1
N
0.704
cassava37607.valid.m1
Manihot esculenta
cassava37607.valid.m1
N
0.704
fgenesh1_pg.scaffold_102000043
Physcomitrella patens
fgenesh1_pg.scaffold_102000043
N
0.704
Lus10004577.g
Linum usitatissimum
Lus10004577.g
N
0.704
SapurV1A.0151s0140
Salix purpurea
SapurV1A.0151s0140
N
0.704
SapurV1A.5427s0010
Salix purpurea
SapurV1A.5427s0010
N
0.704