Bra011992 (Brassica rapa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Bra011992 T315266_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra011992.1-P PLATZ 60 140

Links

Other PLATZ family TFs
Other Brassica rapa TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g073120 Brassica oleracea Bo4g073120 N 0.951
Bra034379 Brassica rapa Bra034379 N 0.914
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.901
Thhalv10017279m.g Eutrema salsugineum Thhalv10017279m.g N 0.901
AT2G27930 Arabidopsis thaliana AT2G27930 N 0.889
Bo4g164920 Brassica oleracea Bo4g164920 N 0.889
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.889
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.889
mgf023930m Mimulus guttatus mgf023930m N 0.792
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.792
PK29286.1 Cannabis sativa PK29286.1 N 0.792
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.778
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.778
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.778
Cla001071 Citrullus lanatus Cla001071 N 0.770
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.767
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.767
GLYMA03G34530 Glycine max GLYMA03G34530 N 0.764
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.764
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.764
Ca_19047 Cicer arietinum Ca_19047 N 0.764
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.764
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.757
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.757
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.757
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.750
MTR_1g062160 Medicago truncatula MTR_1g062160 N 0.750
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.750
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.750
TCM_041560 Theobroma cacao TCM_041560 N 0.747
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.747
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.743
Eucgr.B03915 Eucalyptus grandis Eucgr.B03915 N 0.741
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.736
Ca_00735 Cicer arietinum Ca_00735 N 0.736
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.736
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.736
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.736
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.736
29589.m001281 Ricinus communis 29589.m001281 N 0.733
mgf006916m Mimulus guttatus mgf006916m N 0.733
mgf013167m Mimulus guttatus mgf013167m N 0.733
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.730
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.730
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.730
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.728
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.722
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.722
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.722
30054.m000824 Ricinus communis 30054.m000824 N 0.722
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.722
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.722
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.716
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.708
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.708
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.708
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.708
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.708
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.708
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.708
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.708
OB02G35810 Oryza brachyantha OB02G35810 N 0.708
OB04G30420 Oryza brachyantha OB04G30420 N 0.708
OBART02G28660 Oryza barthii OBART02G28660 N 0.708
OBART04G23520 Oryza barthii OBART04G23520 N 0.708
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.708
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.708
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.708
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.708
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.708
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.708
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.708
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.708
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.708
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.708
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.708
OS02G0692700 Oryza sativa OS02G0692700 N 0.708
OS04G0591100 Oryza sativa OS04G0591100 N 0.708
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.708
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.708
Si010911m.g Setaria italica Si010911m.g N 0.708
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.708
Ca_11505 Cicer arietinum Ca_11505 N 0.708
Cla008966 Citrullus lanatus Cla008966 N 0.708
Cla016461 Citrullus lanatus Cla016461 N 0.708
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.708
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.708
fgenesh1_pg.scaffold_102000043 Physcomitrella patens fgenesh1_pg.scaffold_102000043 N 0.708
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.708
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.708
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.708
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.708
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.708
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.708
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.708
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.708
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.708
PK20928.1 Cannabis sativa PK20928.1 N 0.708
PRUPE_ppa011458mg Prunus persica PRUPE_ppa011458mg N 0.704
Pm001175 Prunus mume Pm001175 N 0.704
Pm012470 Prunus mume Pm012470 N 0.704
MDP0000316069 Malus domestica MDP0000316069 N 0.703
GRMZM2G408887 Zea mays GRMZM2G408887 N 0.700