CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.012070
(
Cucumis sativus
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Cucsa.012070
T315889_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.012070.1
PLATZ
67
144
CKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLPNRFCSIACKV
Links
Other
PLATZ
family TFs
Other
Cucumis sativus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla005897
Citrullus lanatus
Cla005897
N
0.987
Eucgr.G02080
Eucalyptus grandis
Eucgr.G02080
I
0.846
cassava20325.m1
Manihot esculenta
cassava20325.m1
I
0.833
evm.TU.supercontig_2.160
Carica papaya
evm.TU.supercontig_2.160
I
0.821
29968.m000644
Ricinus communis
29968.m000644
I
0.808
Ciclev10016611m.g
Citrus clementina
Ciclev10016611m.g
N
0.808
orange1.1g027579m.g
Citrus sinensis
orange1.1g027579m.g
N
0.808
TCM_011266
Theobroma cacao
TCM_011266
I
0.795
Gorai.013G029900
Gossypium raimondii
Gorai.013G029900
I
0.782
SapurV1A.0015s0650
Salix purpurea
SapurV1A.0015s0650
I
0.782
cassava40347.m1
Manihot esculenta
cassava40347.m1
N
0.769
Gorai.005G152700
Gossypium raimondii
Gorai.005G152700
I
0.769
POPTR_0008s13660
Populus trichocarpa
POPTR_0008s13660
I
0.756
VIT_01s0011g06060
Vitis vinifera
VIT_01s0011g06060
N
0.756
MDP0000290118
Malus domestica
MDP0000290118
I
0.756
PK02661.1
Cannabis sativa
PK02661.1
I
0.756
PRUPE_ppa011075mg
Prunus persica
PRUPE_ppa011075mg
I
0.744
Pm005894
Prunus mume
Pm005894
I
0.744
SapurV1A.0055s0220
Salix purpurea
SapurV1A.0055s0220
I
0.744
POPTR_0010s11410
Populus trichocarpa
POPTR_0010s11410
I
0.731
Gorai.008G170500
Gossypium raimondii
Gorai.008G170500
I
0.731
Lus10013242.g
Linum usitatissimum
Lus10013242.g
I
0.731
Solyc04g008090.2
Solanum lycopersicum
Solyc04g008090.2
N
0.718
mgf026615m
Mimulus guttatus
mgf026615m
N
0.718
Lus10030763.g
Linum usitatissimum
Lus10030763.g
I
0.718