CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J10886
(
Panicum virgatum
)
PLATZ
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04640 (PLATZ)
IPR006734
Pavir.J10886
T316157_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J10886.1.p
PLATZ
27
101
RRYVYRSVVLAKDMMDLKINVSRIQTYIINGQRVVHLRPMNRSKLFRPQPGTPRCLTCDCWLRTWPNLFCSLTCE
Links
Other
PLATZ
family TFs
Other
Panicum virgatum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia03252
Panicum virgatum
Pavir.Ia03252
N
0.973
Si040200m.g
Setaria italica
Si040200m.g
N
0.932
Si039632m.g
Setaria italica
Si039632m.g
N
0.865
GRMZM2G077495
Zea mays
GRMZM2G077495
N
0.770
Sb01g033153
Sorghum bicolor
Sb01g033153
N
0.730
Sb01g033165
Sorghum bicolor
Sb01g033165
N
0.716