CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA12444
(
Caenorhabditis japonica
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
CJA12444
T316414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.896
0.896
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA12444
Prospero
348
501
MLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNNTAQLVKWFSNFREFYYIQMEKFGRQLLAEGVRDRSEIFVTKDSELFKVLNTHYNRNNHIKAPDHLVLVVQETLREFYDAIKLGKDVEPSWKKTIYKIINRMDDQIPDFFKEPNFLE
Links
Other
Prospero
family TFs
Other
Caenorhabditis japonica
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nLs.2.1.2.g05929
Litomosoides sigmodontis
nLs.2.1.2.g05929
N
TCLT_0000442401
Thelazia callipaeda
TCLT_0000442401
N
SVE_0136400
Strongyloides venezuelensis
SVE_0136400
N
SROB_0001931201
Schistosoma rodhaini
SROB_0001931201
N
SPAL_0000766800
Strongyloides papillosus
SPAL_0000766800
N
SMTD_0000624401
Schistosoma mattheei
SMTD_0000624401
N
SMRZ_0002520001
Schistosoma margrebowiei
SMRZ_0002520001
N
scaffold16-EXSNAP2012.158
Pristionchus exspectatus
scaffold16-EXSNAP2012.158
N
RSKR_0000785950
Rhabditophanes kr3021
RSKR_0000785950
N
OFLC_0001387901
Onchocerca flexuosa
OFLC_0001387901
N
OESDEN_00032
Oesophagostomum dentatum
OESDEN_00032
N
nOo.2.0.1.g01120
Onchocerca ochengi
nOo.2.0.1.g01120
N
Bm4231
Brugia malayi
Bm4231
N
NECAME_01802
Necator americanus
NECAME_01802
N
HPBE_0000579401
Heligmosomoides bakeri
HPBE_0000579401
N
HDID_0000845101
Hymenolepis diminuta
HDID_0000845101
N
HCOI02172800
Haemonchus contortus
HCOI02172800
N
DICVIV_08199
Dictyocaulus viviparus
DICVIV_08199
N
CGOC_0000225401
Cylicostephanus goldi
CGOC_0000225401
N
ANCDUO_22594
Ancylostoma duodenale
ANCDUO_22594
N
ANCCEY_01551
Ancylostoma ceylanicum
ANCCEY_01551
N
SMU15038302
Schmidtea mediterranea
SMU15038302
N
Smp_150100
Schistosoma mansoni
Smp_150100
N
CBN17931
Caenorhabditis brenneri
CBN17931
N