Tal_R005550 (Tyto alba)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Tal_R005550 T317823_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELB
M08161_2.00 		Homo sapiens
NNATTCCCCNN
NNGGGGAATNN		 ChIP-seq
Mathelier et al.(2014)
MA1117.1 		0.953 0.953
RELB
M09347_2.00 		Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C 		0.953 0.953
Relb
M09352_2.00 		Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB		 Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C 		0.953 0.953
RELB
M11227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELBP50_Q3 		0.953 0.953
RELA
M02711_2.00 		Homo sapiens
SGGRVTTTCC
GGAAABYCCS		 SELEX
Mathelier et al.(2014)
MA0107.1 		0.721 0.721
RELA
M07999_2.00 		Homo sapiens
DGGGRMTTTCCMVN
NBKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM10847_NFKB_Stanford 		0.721 0.721
RELA
M08000_2.00 		Homo sapiens
NDGGGRMWTTCCHN
NDGGAAWKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_NFKB_Stanford 		0.721 0.721
RELA
M08001_2.00 		Homo sapiens
NDGGGRMTTTCCMVN
NBKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12891_NFKB_Stanford 		0.721 0.721
RELA
M08002_2.00 		Homo sapiens
DGGGRHTTTCCMVNN
NNBKGGAAADYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM12892_NFKB_Stanford 		0.721 0.721
RELA
M08003_2.00 		Homo sapiens
DGGGRVTTTCCHVN
NBDGGAAABYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM15510_NFKB_Stanford 		0.721 0.721
RELA
M08004_2.00 		Homo sapiens
NDGGGRMTTTCCMNN
NNKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18505_NFKB_Stanford 		0.721 0.721
RELA
M08005_2.00 		Homo sapiens
NDGGGRHTTTCCMVN
NBKGGAAADYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18526_NFKB_Stanford 		0.721 0.721
RELA
M08006_2.00 		Homo sapiens
GGGRVTTTCCM
KGGAAABYCCC		 ChIP-seq
Gerstein et al.(2012)
GM18951_NFKB_Stanford 		0.721 0.721
RELA
M08007_2.00 		Homo sapiens
DGGGRMTTTCCMV
BKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19099_NFKB_Stanford 		0.721 0.721
RELA
M08008_2.00 		Homo sapiens
DGGGRMTTTCCMNNN
NNNKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19193_NFKB_Stanford 		0.721 0.721
Rela
M08039_2.00 		Mus musculus
DGGRVTTTCCM
KGGAAABYCCH		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input_LPSstim 		0.721 0.721
Rela
M08038_2.00 		Mus musculus
HHYYYCYYNYHYYYNHYYYYCYWNNSYTBY
RVARSNNWRGRRRRDNRRRDRNRRGRRRDD		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input 		0.721 0.721
RELA
M09351_2.00 		Homo sapiens
NWGGGRHWTTCCMV
BKGGAAWDYCCCWN		 Misc
Kulakovskiy et al.(2013)
TF65_HUMAN.H11MO.0.A 		0.721 0.721
Rela
M09355_2.00 		Mus musculus
KGGRVTTYCCM
KGGRAABYCCM		 Misc
Kulakovskiy et al.(2013)
TF65_MOUSE.H11MO.0.A 		0.721 0.721
RELA
M09626_2.00 		Homo sapiens
DGGGRVWTTCCM
KGGAAWBYCCCH		 Misc
Heinz et al.(2010)
GM12787-p65_GSE19485 		0.721 0.721
RELA
M11237_2.00 		Homo sapiens
BGGRVTTTCC
GGAAABYCCV		 Transfac
Matys et al.(2006)
V$NFKAPPAB65_01 		0.721 0.721
RELA
M11238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_02 		0.721 0.721
RELA
M11239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_03 		0.721 0.721
RELA
M11240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_04 		0.721 0.721
RELA
M11241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_05 		0.721 0.721
RELA
M11242_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_Q6 		0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R005550 Rel 3 45

Links

Other Rel family TFs
Other Tyto alba TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RELB Tupaia belangeri ENSTBEG00000001763 I 0.976
RELB Callithrix jacchus ENSCJAG00000012991 I 0.953
RELB Cavia porcellus ENSCPOG00000010273 I 0.953
Relb Dipodomys ordii ENSDORG00000003448 I 0.953
RELB Homo sapiens ENSG00000104856 D 0.953
RELB Gorilla gorilla ENSGGOG00000003380 I 0.953
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I 0.953
RELB Pan troglodytes ENSPTRG00000011133 I 0.953
RELB Myotis lucifugus ENSMLUG00000006593 I 0.930
RELB Monodelphis domestica ENSMODG00000020855 I 0.930
Aan_R015916 Calypte anna Aan_R015916 I 0.907
RELB Pteropus vampyrus ENSPVAG00000015952 I 0.884
Ogr08766 Ophisaurus gracilis Ogr08766 I 0.860
RELB Anolis carolinensis ENSACAG00000004079 I 0.837
relb Danio rerio ENSDARG00000086173 N 0.837
relb.S Xenopus laevis XB-GENE-6068550 N 0.791
rela.L Xenopus laevis XB-GENE-946512 I 0.744
RELA Cavia porcellus ENSCPOG00000020593 I 0.721
ENSCSAG00000007981 Chlorocebus sabaeus ENSCSAG00000007981 I 0.721
RELA Felis catus ENSFCAG00000005696 I 0.721
RELA Homo sapiens ENSG00000173039 D 0.721
ENSGMOG00000014662 Gadus morhua ENSGMOG00000014662 N 0.721
REL Microcebus murinus ENSMICG00000010062 I 0.721
RELA Myotis lucifugus ENSMLUG00000008727 I 0.721
RELA Macaca mulatta ENSMMUG00000007418 I 0.721
ENSOPRG00000010827 Ochotona princeps ENSOPRG00000010827 I 0.721
ENSPANG00000013650 Papio anubis ENSPANG00000013650 I 0.721
ENSPSIG00000002944 Pelodiscus sinensis ENSPSIG00000002944 I 0.721
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.721
RELA Sorex araneus ENSSARG00000003535 I 0.721
ENSTNIG00000002231 Tetraodon nigroviridis ENSTNIG00000002231 N 0.721
ENSTNIG00000003566 Tetraodon nigroviridis ENSTNIG00000003566 N 0.721
rela Takifugu rubripes ENSTRUG00000008758 N 0.721
RELA Tursiops truncatus ENSTTRG00000002311 I 0.721
ENSXMAG00000011436 Xiphophorus maculatus ENSXMAG00000011436 N 0.721
ENSP00000384273 Macaca fascicularis ENSP00000384273 I 0.721
Myotis_brandtii_Rela_10030730 Myotis brandtii Myotis_brandtii_Rela_10030730 I 0.721
rela Xenopus tropicalis XB-GENE-946506 I 0.721