CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP010248
(
Lucilia cuprina
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
LCUP010248
T317848_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.716
0.716
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.716
0.716
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.716
0.716
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.716
0.716
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.716
0.716
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP010248-PA
Rel
48
217
LKIVEQPAPKGLRFRYICEGRSAGSIPGVHSTPENKTFPTIEVEGYEGKVKIVVSCVTKDEPYRPHPHNLVGKEGCEYGVCLATINGPPMRAVFSNLGIQCVKKKDIKAALEERERKRIDPFKTSFAHKDQPSSIDLNVVRLCFQAFIPLPGVKKPYPIPPVVSDPIHDK
Links
Other
Rel
family TFs
Other
Lucilia cuprina
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDOA012390
Musca domestica
MDOA012390
N
0.757
LCUP010246
Lucilia cuprina
LCUP010246
I
0.722
dl
Drosophila yakuba
FBgn0067431
I
0.716
dl
Drosophila simulans
FBgn0067500
I
0.716
GA19765
Drosophila pseudoobscura
FBgn0079761
I
0.716
GG21746
Drosophila erecta
FBgn0113924
I
0.716
GL18753
Drosophila persimilis
FBgn0156354
I
0.716
GM17128
Drosophila sechellia
FBgn0172039
I
0.716
GK10525
Drosophila willistoni
FBgn0212540
I
0.716
dl
Drosophila melanogaster
FBgn0260632
D
0.716
MDOA008285
Musca domestica
MDOA008285
I
0.716
GF15103
Drosophila ananassae
FBgn0092128
I
0.710
GH10077
Drosophila grimshawi
FBgn0117558
I
0.710
GI16541
Drosophila mojavensis
FBgn0139289
I
0.710
GJ16232
Drosophila virilis
FBgn0203417
I
0.710