CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nfkb2.S
(
Xenopus laevis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
XB-GENE-970090
T317875_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI70267
Rel
46
227
LSIIEQPKQRGFRFRYVCEGPSHGGLPGASSEKGKKTFPTVKIFNYVGMARIEVDLVTHTDPPRVHAHSLVGKHSNETGNCIVTVGPEDMTAQFNNLGIVHVTKKSQTEILKEKMKRNILRNTGRNTLTEVEERKIEQEVKDLKKVTDLSIVRLKFTAYLPDSNGAYTLALPPVISDPIHDS
BAA25919
Rel
45
226
LSIIEQPKQRGFRFRYVCEGPSHRGLPGASSEKGKKTFPTVKIFNYVGMARIEVDLVTHTDPPRVHAHSLVGKHSNKTGNCIVTVGPEDMTAQFNNLGIVHVTKKSQTEILKEKMKRNILRNTGRNTLTEVEERKIEQEVKDLKKVTDLSIVRLKFTAYLPDSNGAYTLALPPVISDPIHDS
Links
Other
Rel
family TFs
Other
Xenopus laevis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nfkb2
Xenopus tropicalis
XB-GENE-970084
I
0.953
NFKB1
Sus scrofa
ENSSSCG00000030957
I
0.857
Alligator_sinensis_CCG009270.1
Alligator sinensis
Alligator_sinensis_CCG009270.1
I
0.799
Brh_R009664
Buceros rhinoceros
Brh_R009664
I
0.793
Cmyd_10006544
Chelonia mydas
Cmyd_10006544
I
0.793
ENSFALG00000007271
Ficedula albicollis
ENSFALG00000007271
I
0.787
ENSOANG00000028755
Ornithorhynchus anatinus
ENSOANG00000028755
I
0.787
NFKB2
Taeniopygia guttata
ENSTGUG00000007491
I
0.787
Aan_R011824
Calypte anna
Aan_R011824
I
0.787
Gfo_R002459
Geospiza fortis
Gfo_R002459
I
0.787
Ogr18048
Ophisaurus gracilis
Ogr18048
I
0.787
NFKB2
Gallus gallus
ENSGALG00000005653
I
0.781
ENSMGAG00000007084
Meleagris gallopavo
ENSMGAG00000007084
I
0.781
Afo_R002575
Aptenodytes forsteri
Afo_R002575
I
0.781
Pvit_13855
Pogona vitticeps
Pvit_13855
I
0.763
NFKB2
Anolis carolinensis
ENSACAG00000014215
I
0.757
ENSAPLG00000013409
Anas platyrhynchos
ENSAPLG00000013409
I
0.757
ENSSHAG00000018852
Sarcophilus harrisii
ENSSHAG00000018852
I
0.704
NFKB1
Homo sapiens
ENSG00000109320
D
0.700