BN946_scf184858.g55 (Trametes cinnabarina)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 BN946_scf184858.g55 T318031_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.652 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.652 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.652 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.652 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.652 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CDO75615 RFX 217 295

Links

Other RFX family TFs
Other Trametes cinnabarina TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DICSQDRAFT_106385 Dichomitus squalens DICSQDRAFT_106385 I 0.788
CERSUDRAFT_149026 Ceriporiopsis subvermispora CERSUDRAFT_149026 I 0.786
AGABI2DRAFT_184602 Agaricus bisporus AGABI2DRAFT_184602 I 0.785
CY34DRAFT_103779 Suillus luteus CY34DRAFT_103779 I 0.785
FOMPIDRAFT_1038544 Fomitopsis pinicola FOMPIDRAFT_1038544 I 0.785
GALMADRAFT_236082 Galerina marginata GALMADRAFT_236082 I 0.785
HETIRDRAFT_170415 Heterobasidion irregulare HETIRDRAFT_170415 I 0.785
K443DRAFT_673983 Laccaria amethystina K443DRAFT_673983 I 0.785
LACBIDRAFT_311799 Laccaria bicolor LACBIDRAFT_311799 I 0.785
M378DRAFT_67300 Amanita muscaria M378DRAFT_67300 I 0.785
M413DRAFT_306124 Hebeloma cylindrosporum M413DRAFT_306124 I 0.785
PHACADRAFT_25186 Phanerochaete carnosa PHACADRAFT_25186 I 0.785
PHLGIDRAFT_115381 Phlebiopsis gigantea PHLGIDRAFT_115381 I 0.785
PILCRDRAFT_94503 Piloderma croceum PILCRDRAFT_94503 I 0.785
SCHCODRAFT_71685 Schizophyllum commune SCHCODRAFT_71685 I 0.785
SERLA73DRAFT_85891 Serpula lacrymans SERLA73DRAFT_85891 I 0.785
fgenesh1_pg.C_scaffold_2000774 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000774 I 0.785
EuGene4000430 Heterobasidion annosum EuGene4000430 I 0.785
FIBRA_04592 Fibroporia radiculosa FIBRA_04592 I 0.784
GLOTRDRAFT_32962 Gloeophyllum trabeum GLOTRDRAFT_32962 I 0.784
JAAARDRAFT_166855 Jaapia argillacea JAAARDRAFT_166855 I 0.784
M404DRAFT_124798 Pisolithus tinctorius M404DRAFT_124798 I 0.783
PISMIDRAFT_670796 Pisolithus microcarpus PISMIDRAFT_670796 I 0.783
SCLCIDRAFT_138144 Scleroderma citrinum SCLCIDRAFT_138144 I 0.783
Moror_7356 Moniliophthora roreri Moror_7356 N 0.780
PAXRUDRAFT_31952 Paxillus rubicundulus PAXRUDRAFT_31952 I 0.780
PLEOSDRAFT_1038101 Pleurotus ostreatus PLEOSDRAFT_1038101 I 0.780
BOTBODRAFT_100719 Botryobasidium botryosum BOTBODRAFT_100719 N 0.777
CC1G_00311 Coprinopsis cinerea CC1G_00311 I 0.777
M407DRAFT_70388 Tulasnella calospora M407DRAFT_70388 I 0.777
V565_046180 Rhizoctonia solani V565_046180 N 0.770
PIIN_08876 Piriformospora indica PIIN_08876 N 0.769
M408DRAFT_113587 Serendipita vermifera M408DRAFT_113587 N 0.764
DACRYDRAFT_45233 Dacryopinax sp DACRYDRAFT_45233 I 0.758
PGTG_11391 Puccinia graminis PGTG_11391 I 0.727
PTTG_01668 Puccinia triticina PTTG_01668 I 0.708
E5Q_03025 Mixia osmundae E5Q_03025 I 0.696
E5Q_03026 Mixia osmundae E5Q_03026 I 0.696
fgeneshTM_pg.2_#_559 Tremella mesenterica fgeneshTM_pg.2_#_559 I 0.695
MVLG_04348 Microbotryum violaceum MVLG_04348 I 0.683
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.675
A1Q1_00828 Trichosporon asahii A1Q1_00828 I 0.672
GPLIN_000191300 Globodera pallida GPLIN_000191300 I 0.666
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.665
O9G_004738 Rozella allomycis O9G_004738 I 0.665
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.663
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.663
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.663
NERG_01713 Nematocida sp NERG_01713 I 0.661
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.658
NEPG_00460 Nematocida parisii ertm1 NEPG_00460 I 0.658
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.658
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.658
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.658
SMUV_0001085601 Syphacia muris SMUV_0001085601 I 0.657
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.656
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.656
EVEC_0001085201 Enterobius vermicularis EVEC_0001085201 I 0.656
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.655
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.655
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.655
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.655
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.654
HelroG82191 Helobdella robusta HelroG82191 I 0.654
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.654
tetur19g03130 Tetranychus urticae tetur19g03130 I 0.654
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.654
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.653
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.653
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.653
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.653
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.653
PTSG_10225 Salpingoeca rosetta PTSG_10225 I 0.652
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.652
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.652
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.652
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.652
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.652
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.652
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.652
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.652
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.652
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.652
RFX1 Saccharomyces cerevisiae YLR176C D 0.652
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.652
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.652
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.652
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.651
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.651
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.651
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.651
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.651
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.651
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.651
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.651
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.651
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.651
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.651
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.651
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.651
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.651
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.651
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.651
A1O1_08600 Capronia coronata A1O1_08600 I 0.650
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.650
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.650
ML02801a Mnemiopsis leidyi ML02801a I 0.650
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.650
PDE_02161 Penicillium oxalicum PDE_02161 I 0.650
PHSY_002871 Pseudozyma hubeiensis PHSY_002871 N 0.650
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.650
PV06_00023 Exophiala oligosperma PV06_00023 I 0.650
PV08_04071 Exophiala spinifera PV08_04071 I 0.650
PV10_05596 Exophiala mesophila PV10_05596 I 0.650
sr13205 Sporisorium reilianum sr13205 N 0.650
UHOR_03310 Ustilago hordei UHOR_03310 N 0.650
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.650
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.650
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.650