Alligator_sinensis_CCG004973.1 (Alligator sinensis)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 Alligator_sinensis_CCG004973.1 T318948_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG004973.1 RFX 504 586

Links

Other RFX family TFs
Other Alligator sinensis TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N 0.803
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.802
ARID2 Bos taurus ENSBTAG00000011087 N 0.802
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N 0.802
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N 0.802
ARID2 Equus caballus ENSECAG00000019032 N 0.802
ARID2 Loxodonta africana ENSLAFG00000004415 N 0.802
ARID2 Microcebus murinus ENSMICG00000001487 N 0.802
ARID2 Macaca mulatta ENSMMUG00000015962 N 0.802
ARID2 Monodelphis domestica ENSMODG00000018527 N 0.802
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N 0.802
ARID2 Pteropus vampyrus ENSPVAG00000009834 N 0.802
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N 0.802
ARID2 Vicugna pacos ENSVPAG00000004779 N 0.802
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N 0.802
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N 0.802
Tal_R007164 Tyto alba Tal_R007164 N 0.801
ARID2 Myotis lucifugus ENSMLUG00000006908 N 0.800
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N 0.800
ARID2 Canis familiaris ENSCAFG00000009335 N 0.798
ARID2 Felis catus ENSFCAG00000012831 N 0.798
ARID2 Homo sapiens ENSG00000189079 N 0.798
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N 0.797
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N 0.795
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N 0.793
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N 0.753
ARID2 Sorex araneus ENSSARG00000007415 N 0.747
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I 0.719
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N 0.718
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N 0.706
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.677
CLEC001081 Cimex lectularius CLEC001081 N 0.672
ACEP25962 Atta cephalotes ACEP25962 N 0.671
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N 0.668
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N 0.667
ISCW014107 Ixodes scapularis ISCW014107 N 0.666
HelroG195033 Helobdella robusta HelroG195033 N 0.665
SINV17530 Solenopsis invicta SINV17530 N 0.665
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N 0.657
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N 0.657
PTSG_01032 Salpingoeca rosetta PTSG_01032 I 0.656
PHUM060660 Pediculus humanus PHUM060660 N 0.656
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N 0.655
MDOA004973 Musca domestica MDOA004973 I 0.654