CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002492279.1
(
Pichia pastoris
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
XP_002492279.1
T319109_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002492279.1
RFX
266
339
HSHSPNRSTSLIASVPRVHVYATYHRLTESCHVEPFGSSSLGKLLRITFSGIQTKRLGTRGQSKYHYMGIDIKP
Links
Other
RFX
family TFs
Other
Pichia pastoris
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAS_chr3_0071
Komagataella pastoris
PAS_chr3_0071
N
0.760
PV09_00065
Verruconis gallopava
PV09_00065
I
0.669
BDDG_02784
Blastomyces dermatitidis
BDDG_02784
I
0.667
PMAA_084960
Talaromyces marneffei
PMAA_084960
I
0.664
TSTA_119980
Talaromyces stipitatus
TSTA_119980
I
0.664
PMAA_084960
Penicillium marneffei
PMAA_084960
I
0.664
THITE_2107553
Thielavia terrestris
THITE_2107553
I
0.661
HCBG_05483
Histoplasma capsulatum
HCBG_05483
I
0.660
PAAG_00480
Paracoccidioides sp lutzii
PAAG_00480
I
0.660
PABG_06744
Paracoccidioides brasiliensis
PABG_06744
I
0.660
FFUJ_02499
Fusarium fujikuroi
FFUJ_02499
I
0.659
FGRRES_07420
Fusarium graminearum
FGRRES_07420
I
0.659
FOXG_01471
Fusarium oxysporum
FOXG_01471
I
0.659
FPSE_09383
Fusarium pseudograminearum
FPSE_09383
I
0.659
FVEG_07837
Fusarium verticillioides
FVEG_07837
I
0.659
PVAR5_6603
Byssochlamys spectabilis
PVAR5_6603
I
0.659
sak1
Schizosaccharomyces pombe
SPAC3G9.14
I
0.659
UV8b_7132
Ustilaginoidea virens
UV8b_7132
I
0.659
LEMA_P019700.1
Leptosphaeria maculans
LEMA_P019700.1
I
0.658
ACRE_029400
Acremonium chrysogenum
ACRE_029400
I
0.657
MPH_13091
Macrophomina phaseolina
MPH_13091
I
0.657
SOCG_01623
Schizosaccharomyces octosporus
SOCG_01623
I
0.657
SPOG_03909
Schizosaccharomyces cryophilus
SPOG_03909
I
0.657
CIMG_05985
Coccidioides immitis
CIMG_05985
I
0.656
ACLA_009440
Aspergillus clavatus
CADACLAG00001004
I
0.656
CADAFLAG00010851
Aspergillus flavus
CADAFLAG00010851
I
0.656
AFUA_5G06120
Aspergillus fumigatus
CADAFUAG00006202
I
0.656
CADANGAG00013568
Aspergillus niger
CADANGAG00013568
I
0.656
CADAORAG00004061
Aspergillus oryzae
CADAORAG00004061
I
0.656
ATEG_09416
Aspergillus terreus
CADATEAG00008983
I
0.656
NFIA_036980
Neosartorya fischeri
CADNFIAG00003299
I
0.656
CPC735_025690
Coccidioides posadasii
CPC735_025690
I
0.656
EURHEDRAFT_516724
Aspergillus ruber
EURHEDRAFT_516724
I
0.656
GMDG_00789
Pseudogymnoascus destructans
GMDG_00789
I
0.656
MBM_03129
Marssonina brunnea
MBM_03129
I
0.656
MYCFIDRAFT_10959
Pseudocercospora fijiensis
MYCFIDRAFT_10959
I
0.656
OIDMADRAFT_184073
Oidiodendron maius
OIDMADRAFT_184073
I
0.656
PCH_Pc20g01690
Penicillium rubens
PCH_Pc20g01690
I
0.656
PDIP_47410
Penicillium digitatum
PDIP_47410
I
0.656
PEX1_087840
Penicillium expansum
PEX1_087840
I
0.656
PITC_028740
Penicillium italicum
PITC_028740
I
0.656
SBOR_6602
Sclerotinia borealis
SBOR_6602
I
0.656
SEPMUDRAFT_46603
Sphaerulina musiva
SEPMUDRAFT_46603
I
0.656
SJAG_04839
Schizosaccharomyces japonicus
SJAG_04839
I
0.656
U727_0043066021
Penicillium solitum
U727_0043066021
I
0.656
UREG_04378
Uncinocarpus reesii
UREG_04378
I
0.656
V499_05779
Pseudogymnoascus pannorum
V499_05779
I
0.656
gw1.15.255.1
Mycosphaerella fijiensis
gw1.15.255.1
I
0.656
fgenesh1_pg.00162_#_176
Aspergillus carbonarius
fgenesh1_pg.00162_#_176
I
0.656
Pc20g01690
Penicillium chrysogenum
Pc20g01690
I
0.656
MCYG_06867
Microsporum canis
MCYG_06867
I
0.655
SNOG_15366
Stagonospora nodorum
SNOG_15366
I
0.655
BAUCODRAFT_23427
Baudoinia compniacensis
BAUCODRAFT_23427
I
0.655
ANIA_02296
Aspergillus nidulans
CADANIAG00008989
I
0.655
CPUR_03868
Claviceps purpurea
CPUR_03868
I
0.655
CTHT_0028340
Chaetomium thermophilum
CTHT_0028340
I
0.655
DOTSEDRAFT_132769
Dothistroma septosporum
DOTSEDRAFT_132769
I
0.655
MCYG_06867
Arthroderma otae
MCYG_06867
I
0.655
PDE_02161
Penicillium oxalicum
PDE_02161
I
0.655
SNOG_15366
Phaeosphaeria nodorum
SNOG_15366
I
0.655
W97_05844
Coniosporium apollinis
W97_05844
I
0.655
ARB_07111
Arthroderma benhamiae
ARB_07111
I
0.654
BBA_07182
Beauveria bassiana
BBA_07182
I
0.654
Bcin03g02360
Botrytis cinerea
Bcin03g02360
I
0.654
CCM_03895
Cordyceps militaris
CCM_03895
I
0.654
COCC4DRAFT_162970
Bipolaris maydis
COCC4DRAFT_162970
I
0.654
COCCADRAFT_29061
Bipolaris zeicola
COCCADRAFT_29061
I
0.654
COCMIDRAFT_23254
Bipolaris oryzae
COCMIDRAFT_23254
I
0.654
COCSADRAFT_34318
Bipolaris sorokiniana
COCSADRAFT_34318
I
0.654
COCVIDRAFT_40879
Bipolaris victoriae
COCVIDRAFT_40879
I
0.654
H101_06747
Trichophyton interdigitale
H101_06747
I
0.654
H102_04304
Trichophyton rubrum
H102_04304
I
0.654
H105_04329
Trichophyton soudanense
H105_04329
I
0.654
MAC_02434
Metarhizium acridum
MAC_02434
I
0.654
MAM_06665
Metarhizium album
MAM_06665
I
0.654
MGYG_03742
Microsporum gypseum
MGYG_03742
I
0.654
Mycgr3G110369
Zymoseptoria tritici
Mycgr3G110369
I
0.654
MYCTH_2301302
Myceliophthora thermophila
MYCTH_2301302
I
0.654
OCS_02678
Ophiocordyceps sinensis
OCS_02678
I
0.654
SETTUDRAFT_147537
Setosphaeria turcica
SETTUDRAFT_147537
I
0.654
SS1G_00575
Sclerotinia sclerotiorum
SS1G_00575
I
0.654
TEQG_02965
Trichophyton equinum
TEQG_02965
I
0.654
TESG_00180
Trichophyton tonsurans
TESG_00180
I
0.654
TRIATDRAFT_83492
Trichoderma atroviride
TRIATDRAFT_83492
I
0.654
TRIREDRAFT_69349
Trichoderma reesei
TRIREDRAFT_69349
I
0.654
TRIVIDRAFT_34449
Trichoderma virens
TRIVIDRAFT_34449
I
0.654
TRV_04907
Trichophyton verrucosum
TRV_04907
I
0.654
UCRPA7_1505
Togninia minima
UCRPA7_1505
I
0.654
VHEMI10038
Torrubiella hemipterigena
VHEMI10038
I
0.654
estExt_fgenesh1_pg.C_chr_80140
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_80140
I
0.654
AB07822.1
Alternaria brassicicola
AB07822.1
I
0.654
VDBG_04171
Verticillium albo atrum
VDBG_04171
I
0.653
AOL_s00215g602
Arthrobotrys oligospora
AOL_s00215g602
I
0.653
CGGC5_15149
Colletotrichum gloeosporioides
CGGC5_15149
I
0.653
Cob_11986
Colletotrichum orbiculare
Cob_11986
I
0.653
H072_327
Dactylellina haptotyla
H072_327
I
0.653
NechaG49316
Fusarium solani
NechaG49316
I
0.653
NEUTE1DRAFT_119738
Neurospora tetrasperma
NEUTE1DRAFT_119738
I
0.653
SMAC_06634
Sordaria macrospora
SMAC_06634
I
0.653
VDAG_01397
Verticillium dahliae
VDAG_01397
I
0.653
VDBG_04171
Verticillium alfalfae
VDBG_04171
I
0.653
e_gw1.6.922.1
Nectria haematococca
e_gw1.6.922.1
I
0.653
NCU06701
Neurospora crassa
NCU06701
I
0.653
A1O1_08600
Capronia coronata
A1O1_08600
I
0.652
A1O5_04383
Cladophialophora psammophila
A1O5_04383
I
0.652
AUEXF2481DRAFT_78728
Aureobasidium subglaciale
AUEXF2481DRAFT_78728
I
0.652
BGHDH14_bgh05888
Blumeria graminis
BGHDH14_bgh05888
I
0.652
CFIO01_07583
Colletotrichum fioriniae
CFIO01_07583
I
0.652
CH063_09103
Colletotrichum higginsianum
CH063_09103
I
0.652
CSUB01_01029
Colletotrichum sublineola
CSUB01_01029
I
0.652
DRE_06212
Drechslerella stenobrocha
DRE_06212
I
0.652
EV44_g5273
Erysiphe necator
EV44_g5273
I
0.652
GLRG_03233
Colletotrichum graminicola
GLRG_03233
I
0.652
GNLVRS01_PISO0M04676g
Millerozyma farinosa
GNLVRS01_PISO0M04676g
N
0.652
HMPREF1120_04684
Exophiala dermatitidis
HMPREF1120_04684
I
0.652
M437DRAFT_81253
Aureobasidium melanogenum
M437DRAFT_81253
I
0.652
M438DRAFT_393589
Aureobasidium pullulans
M438DRAFT_393589
I
0.652
MAJ_05697
Metarhizium majus
MAJ_05697
I
0.652
MANI_023048
Metarhizium anisopliae
MANI_023048
I
0.652
MGU_07283
Metarhizium guizhouense
MGU_07283
I
0.652
PV05_05335
Exophiala xenobiotica
PV05_05335
I
0.652
PV06_00023
Exophiala oligosperma
PV06_00023
I
0.652
PV07_06647
Cladophialophora immunda
PV07_06647
I
0.652
PV08_04071
Exophiala spinifera
PV08_04071
I
0.652
PV10_05596
Exophiala mesophila
PV10_05596
I
0.652
PV11_01295
Exophiala sideris
PV11_01295
I
0.652
X797_002751
Metarhizium robertsii
X797_002751
I
0.652
Z517_10332
Fonsecaea pedrosoi
Z517_10332
I
0.652
A1O3_08026
Capronia epimyces
A1O3_08026
I
0.651
A1O9_03272
Exophiala aquamarina
A1O9_03272
I
0.651
ENSCSAVG00000006455
Ciona savignyi
ENSCSAVG00000006455
I
0.651
EPUS_04947
Endocarpon pusillum
EPUS_04947
I
0.651
F503_07504
Ophiostoma piceae uamh
F503_07504
I
0.651
GGTG_07952
Gaeumannomyces graminis
GGTG_07952
I
0.651
HMPREF1624_04412
Sporothrix schenckii
HMPREF1624_04412
I
0.651
MAPG_07750
Magnaporthe poae
MAPG_07750
I
0.651
MBR_03889
Metarhizium brunneum
MBR_03889
I
0.651
PFICI_07890
Pestalotiopsis fici
PFICI_07890
I
0.651
PODANS_2_5740
Podospora anserina
PODANS_2_5740
I
0.651
PV04_03763
Capronia semiimmersa
PV04_03763
I
0.651
SAPIO_CDS9685
Scedosporium apiospermum
SAPIO_CDS9685
I
0.651
SPBR_05608
Sporothrix brasiliensis
SPBR_05608
I
0.651
Z518_01660
Rhinocladiella mackenziei
Z518_01660
I
0.651
fgenesh1_pg.C_scaffold_1001176
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1001176
I
0.651
G647_04815
Cladophialophora carrionii
G647_04815
I
0.650
PTRG_01267
Pyrenophora triticirepentis
PTRG_01267
I
0.650
PTT_09109
Pyrenophora teres
PTT_09109
I
0.650