CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ECPE_0001391801
(
Echinostoma caproni
)
RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02257 (RFX_DNA_binding)
IPR003150
ECPE_0001391801
T319186_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ECPE_0001391801-mRNA-1
RFX
1
42
MKTLNTADFGKVMKRAFPNVKPRRLGQRGQSRYCYGGMRKKT
Links
Other
RFX
family TFs
Other
Echinostoma caproni
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_040350
Schistosoma mansoni
Smp_040350
I
0.678
A_01977
Schistosoma haematobium
A_01977
I
0.678
csin102559
Clonorchis sinensis
csin102559
I
0.678
T265_11740
Opisthorchis viverrini
T265_11740
I
0.678
HDID_0000095701
Hymenolepis diminuta
HDID_0000095701
I
0.677
HmN_000672900
Hymenolepis microstoma
HmN_000672900
I
0.677
HNAJ_0001122601
Hymenolepis nana
HNAJ_0001122601
I
0.677
ECANG7_06078
Echinococcus canadensis
ECANG7_06078
I
0.675
EmuJ_001055400
Echinococcus multilocularis
EmuJ_001055400
I
0.675
TsM_000553100
Taenia solium
TsM_000553100
I
0.675
TTAC_0000027401
Hydatigera taeniaeformis
TTAC_0000027401
I
0.675
Sjc_0019090
Schistosoma japonicum
Sjc_0019090
I
0.664
SROB_0001335501
Schistosoma rodhaini
SROB_0001335501
I
0.664
DAPPUDRAFT_64123
Daphnia pulex
DAPPUDRAFT_64123
I
0.654
HMEL011744
Heliconius melpomene
HMEL011744
I
0.654
KGM_16732
Danaus plexippus
KGM_16732
I
0.654
MCINX003210
Melitaea cinxia
MCINX003210
I
0.653
ACEP24602
Atta cephalotes
ACEP24602
I
0.651
GB49419
Apis mellifera
GB49419
I
0.651
NV23037
Nasonia vitripennis
NV23037
I
0.651
SINV24627
Solenopsis invicta
SINV24627
I
0.651
Hsal_12778--XP_001120516.1_APIME
Harpegnathos saltator
Hsal_12778--XP_001120516.1_APIME
I
0.651
Ocbimv22017482m.g
Octopus bimaculoides
Ocbimv22017482m.g
I
0.651