CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ACEP16409
(
Atta cephalotes
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00853 (Runt)
IPR013524
ACEP16409
T319292_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.768
0.768
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.768
0.768
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.768
0.768
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.768
0.768
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN
NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.747
0.747
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV
BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.747
0.747
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.747
0.747
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV
BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.747
0.747
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.747
0.747
Runx1
M09633_2.00
Mus musculus
NWAACCACAR
YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.747
0.747
RUNX1
M11258_2.00
Homo sapiens
ACCRCA
TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.747
0.747
RUNX1
M11259_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.747
0.747
RUNX1
M11260_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.747
0.747
RUNX1
M11261_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.747
0.747
RUNX1
M11262_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.747
0.747
RUNX1
M11263_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.747
0.747
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.727
0.727
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.727
0.727
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.727
0.727
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.727
0.727
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.727
0.727
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.727
0.727
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.727
0.727
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.727
0.727
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.727
0.727
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.727
0.727
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.727
0.727
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.727
0.727
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.707
0.707
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.707
0.707
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.707
0.707
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.707
0.707
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.707
0.707
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.707
0.707
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.707
0.707
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.707
0.707
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.707
0.707
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.707
0.707
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.707
0.707
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.707
0.707
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP16409-PA
Runt
148
246
VGEAQAEHPGELVRTGSPYFLCSQLPTHWRSNKTLPVAFKVVALGEVGDGTLVTVRAGNDENCCAELRNSTALMKNQVAKFNDLRFVGRSGRVQWRVAF
Links
Other
Runt
family TFs
Other
Atta cephalotes
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_007350
Trichomonas vaginalis
TVAG_007350
N
TVAG_008370
Trichomonas vaginalis
TVAG_008370
I
TVAG_011860
Trichomonas vaginalis
TVAG_011860
N
TVAG_017810
Trichomonas vaginalis
TVAG_017810
I
TVAG_018140
Trichomonas vaginalis
TVAG_018140
I
TVAG_030320
Trichomonas vaginalis
TVAG_030320
I
TVAG_033530
Trichomonas vaginalis
TVAG_033530
I
TVAG_033770
Trichomonas vaginalis
TVAG_033770
I
TVAG_034560
Trichomonas vaginalis
TVAG_034560
I
TVAG_041220
Trichomonas vaginalis
TVAG_041220
I
TVAG_048400
Trichomonas vaginalis
TVAG_048400
N
TVAG_048500
Trichomonas vaginalis
TVAG_048500
N
TVAG_048830
Trichomonas vaginalis
TVAG_048830
I
TVAG_049600
Trichomonas vaginalis
TVAG_049600
I
TVAG_050010
Trichomonas vaginalis
TVAG_050010
I
TVAG_058550
Trichomonas vaginalis
TVAG_058550
I
TVAG_068520
Trichomonas vaginalis
TVAG_068520
N
TVAG_071510
Trichomonas vaginalis
TVAG_071510
N
TVAG_074130
Trichomonas vaginalis
TVAG_074130
I
TVAG_085400
Trichomonas vaginalis
TVAG_085400
I
TVAG_105110
Trichomonas vaginalis
TVAG_105110
I
TVAG_106110
Trichomonas vaginalis
TVAG_106110
I
TVAG_122130
Trichomonas vaginalis
TVAG_122130
I
TVAG_125240
Trichomonas vaginalis
TVAG_125240
N
TVAG_129110
Trichomonas vaginalis
TVAG_129110
N
TVAG_129120
Trichomonas vaginalis
TVAG_129120
N
TVAG_132500
Trichomonas vaginalis
TVAG_132500
N
TVAG_138190
Trichomonas vaginalis
TVAG_138190
I
TVAG_141020
Trichomonas vaginalis
TVAG_141020
I
TVAG_161450
Trichomonas vaginalis
TVAG_161450
N
TVAG_164660
Trichomonas vaginalis
TVAG_164660
N
TVAG_164960
Trichomonas vaginalis
TVAG_164960
N
TVAG_170760
Trichomonas vaginalis
TVAG_170760
I
TVAG_170790
Trichomonas vaginalis
TVAG_170790
I
TVAG_179440
Trichomonas vaginalis
TVAG_179440
I
TVAG_181200
Trichomonas vaginalis
TVAG_181200
I
TVAG_187200
Trichomonas vaginalis
TVAG_187200
I
TVAG_187270
Trichomonas vaginalis
TVAG_187270
N
TVAG_194980
Trichomonas vaginalis
TVAG_194980
I
TVAG_200950
Trichomonas vaginalis
TVAG_200950
I
TVAG_203070
Trichomonas vaginalis
TVAG_203070
N
TVAG_203550
Trichomonas vaginalis
TVAG_203550
I
TVAG_205770
Trichomonas vaginalis
TVAG_205770
N
TVAG_207810
Trichomonas vaginalis
TVAG_207810
N
TVAG_208090
Trichomonas vaginalis
TVAG_208090
I
TVAG_208170
Trichomonas vaginalis
TVAG_208170
I
TVAG_209560
Trichomonas vaginalis
TVAG_209560
I
TVAG_213270
Trichomonas vaginalis
TVAG_213270
I
TVAG_214740
Trichomonas vaginalis
TVAG_214740
N
TVAG_215750
Trichomonas vaginalis
TVAG_215750
N
TVAG_217510
Trichomonas vaginalis
TVAG_217510
I
TVAG_218720
Trichomonas vaginalis
TVAG_218720
I
TVAG_223440
Trichomonas vaginalis
TVAG_223440
I
TVAG_223860
Trichomonas vaginalis
TVAG_223860
I
TVAG_236320
Trichomonas vaginalis
TVAG_236320
I
TVAG_242410
Trichomonas vaginalis
TVAG_242410
I
TVAG_243160
Trichomonas vaginalis
TVAG_243160
I
TVAG_255490
Trichomonas vaginalis
TVAG_255490
I
TVAG_258650
Trichomonas vaginalis
TVAG_258650
I
TVAG_261360
Trichomonas vaginalis
TVAG_261360
N
TVAG_262670
Trichomonas vaginalis
TVAG_262670
N
TVAG_264480
Trichomonas vaginalis
TVAG_264480
I
TVAG_274390
Trichomonas vaginalis
TVAG_274390
I
TVAG_281620
Trichomonas vaginalis
TVAG_281620
I
TVAG_284950
Trichomonas vaginalis
TVAG_284950
N
TVAG_286860
Trichomonas vaginalis
TVAG_286860
I
TVAG_287290
Trichomonas vaginalis
TVAG_287290
I
TVAG_287680
Trichomonas vaginalis
TVAG_287680
I
TVAG_290350
Trichomonas vaginalis
TVAG_290350
I
TVAG_297830
Trichomonas vaginalis
TVAG_297830
I
TVAG_298530
Trichomonas vaginalis
TVAG_298530
I
TVAG_298590
Trichomonas vaginalis
TVAG_298590
N
TVAG_300190
Trichomonas vaginalis
TVAG_300190
N
TVAG_301700
Trichomonas vaginalis
TVAG_301700
N
TVAG_304110
Trichomonas vaginalis
TVAG_304110
I
TVAG_312030
Trichomonas vaginalis
TVAG_312030
I
TVAG_313920
Trichomonas vaginalis
TVAG_313920
N
TVAG_314440
Trichomonas vaginalis
TVAG_314440
N
TVAG_315670
Trichomonas vaginalis
TVAG_315670
I
TVAG_315700
Trichomonas vaginalis
TVAG_315700
I
TVAG_317360
Trichomonas vaginalis
TVAG_317360
I
TVAG_318220
Trichomonas vaginalis
TVAG_318220
I
TVAG_320670
Trichomonas vaginalis
TVAG_320670
I
TVAG_321230
Trichomonas vaginalis
TVAG_321230
I
TVAG_322890
Trichomonas vaginalis
TVAG_322890
N
TVAG_330350
Trichomonas vaginalis
TVAG_330350
N
TVAG_333520
Trichomonas vaginalis
TVAG_333520
I
TVAG_336250
Trichomonas vaginalis
TVAG_336250
I
TVAG_347110
Trichomonas vaginalis
TVAG_347110
I
TVAG_356380
Trichomonas vaginalis
TVAG_356380
N
TVAG_356580
Trichomonas vaginalis
TVAG_356580
I
TVAG_358740
Trichomonas vaginalis
TVAG_358740
I
TVAG_372820
Trichomonas vaginalis
TVAG_372820
N
TVAG_384340
Trichomonas vaginalis
TVAG_384340
I
TVAG_384790
Trichomonas vaginalis
TVAG_384790
N
TVAG_384980
Trichomonas vaginalis
TVAG_384980
I
TVAG_386750
Trichomonas vaginalis
TVAG_386750
N
TVAG_389220
Trichomonas vaginalis
TVAG_389220
N
TVAG_398170
Trichomonas vaginalis
TVAG_398170
I
TVAG_406620
Trichomonas vaginalis
TVAG_406620
I
TVAG_407290
Trichomonas vaginalis
TVAG_407290
I
TVAG_407860
Trichomonas vaginalis
TVAG_407860
I
TVAG_410790
Trichomonas vaginalis
TVAG_410790
N
TVAG_417620
Trichomonas vaginalis
TVAG_417620
I
TVAG_418370
Trichomonas vaginalis
TVAG_418370
I
TVAG_422850
Trichomonas vaginalis
TVAG_422850
I
TVAG_428400
Trichomonas vaginalis
TVAG_428400
I
TVAG_429070
Trichomonas vaginalis
TVAG_429070
N
TVAG_431290
Trichomonas vaginalis
TVAG_431290
I
TVAG_443860
Trichomonas vaginalis
TVAG_443860
I
TVAG_446510
Trichomonas vaginalis
TVAG_446510
I
TVAG_448590
Trichomonas vaginalis
TVAG_448590
I
TVAG_449400
Trichomonas vaginalis
TVAG_449400
N
TVAG_450400
Trichomonas vaginalis
TVAG_450400
I
TVAG_451310
Trichomonas vaginalis
TVAG_451310
I
TVAG_464320
Trichomonas vaginalis
TVAG_464320
I
TVAG_466180
Trichomonas vaginalis
TVAG_466180
N
TVAG_466400
Trichomonas vaginalis
TVAG_466400
I
TVAG_467150
Trichomonas vaginalis
TVAG_467150
N
TVAG_469670
Trichomonas vaginalis
TVAG_469670
I
TVAG_471660
Trichomonas vaginalis
TVAG_471660
I
TVAG_474270
Trichomonas vaginalis
TVAG_474270
I
TVAG_481770
Trichomonas vaginalis
TVAG_481770
I
TVAG_484270
Trichomonas vaginalis
TVAG_484270
I
TVAG_485740
Trichomonas vaginalis
TVAG_485740
I
TVAG_488790
Trichomonas vaginalis
TVAG_488790
N
TVAG_490690
Trichomonas vaginalis
TVAG_490690
I
TVAG_492320
Trichomonas vaginalis
TVAG_492320
I
TVAG_494850
Trichomonas vaginalis
TVAG_494850
I
TVAG_500220
Trichomonas vaginalis
TVAG_500220
I
TVAG_501520
Trichomonas vaginalis
TVAG_501520
I
TVAG_511900
Trichomonas vaginalis
TVAG_511900
I
TVAG_514140
Trichomonas vaginalis
TVAG_514140
I
TVAG_515220
Trichomonas vaginalis
TVAG_515220
N
TVAG_518010
Trichomonas vaginalis
TVAG_518010
I
TVAG_518770
Trichomonas vaginalis
TVAG_518770
I
TVAG_520250
Trichomonas vaginalis
TVAG_520250
N
TVAG_525230
Trichomonas vaginalis
TVAG_525230
I
TVAG_528950
Trichomonas vaginalis
TVAG_528950
I
TVAG_535080
Trichomonas vaginalis
TVAG_535080
I
TVAG_535180
Trichomonas vaginalis
TVAG_535180
I
TVAG_544290
Trichomonas vaginalis
TVAG_544290
I
TVAG_547380
Trichomonas vaginalis
TVAG_547380
I
TVAG_550490
Trichomonas vaginalis
TVAG_550490
N
TVAG_551090
Trichomonas vaginalis
TVAG_551090
I
TVAG_551410
Trichomonas vaginalis
TVAG_551410
I
TVAG_552810
Trichomonas vaginalis
TVAG_552810
I
TVAG_555690
Trichomonas vaginalis
TVAG_555690
I
TVAG_556150
Trichomonas vaginalis
TVAG_556150
I
TVAG_563060
Trichomonas vaginalis
TVAG_563060
I
TVAG_563360
Trichomonas vaginalis
TVAG_563360
I
TVAG_566490
Trichomonas vaginalis
TVAG_566490
I
TVAG_568980
Trichomonas vaginalis
TVAG_568980
I
TVAG_578750
Trichomonas vaginalis
TVAG_578750
I
TVAG_579060
Trichomonas vaginalis
TVAG_579060
N
TVAG_579860
Trichomonas vaginalis
TVAG_579860
I
TVAG_581440
Trichomonas vaginalis
TVAG_581440
N
TVAG_583970
Trichomonas vaginalis
TVAG_583970
N
TVAG_590210
Trichomonas vaginalis
TVAG_590210
I
TVAG_595500
Trichomonas vaginalis
TVAG_595500
I
TVAG_595910
Trichomonas vaginalis
TVAG_595910
I
TVAG_597870
Trichomonas vaginalis
TVAG_597870
I