MDOA010744 (Musca domestica)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 MDOA010744 T319776_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.831 0.831
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.831 0.831
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.831 0.831
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.831 0.831
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.715 0.715
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.715 0.715
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.715 0.715
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.715 0.715
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.715 0.715
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.715 0.715
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.715 0.715
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.715 0.715
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.715 0.715
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.715 0.715
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.715 0.715
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.715 0.715
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.708 0.708
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.708 0.708
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.708 0.708
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.708 0.708
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.708 0.708
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.708 0.708
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.708 0.708
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.708 0.708
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.708 0.708
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.708 0.708
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.708 0.708
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.708 0.708
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.708 0.708
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.708 0.708
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.708 0.708
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.708 0.708
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.708 0.708
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.708 0.708
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.708 0.708
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.708 0.708
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.708 0.708
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.708 0.708
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.708 0.708
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDOA010744-PA Runt 275 404

Links

Other Runt family TFs
Other Musca domestica TFs

285 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAV2 Arabidopsis thaliana AT1G68840 D
RAV1 Arabidopsis thaliana AT1G13260 D
ARF14 Arabidopsis thaliana AT3G25730 D
AMTR_s00007p00238950 Amborella trichopoda AMTR_s00007p00238950 I
BGIOSGA002747 Oryza indica BGIOSGA002747 I
BGIOSGA002748 Oryza indica BGIOSGA002748 I
BGIOSGA002753 Oryza indica BGIOSGA002753 I
BGIOSGA020315 Oryza indica BGIOSGA020315 I
Bo2g061320 Brassica oleracea Bo2g061320 I
Bo2g138650 Brassica oleracea Bo2g138650 I
Bo3g138550 Brassica oleracea Bo3g138550 I
Bo5g015210 Brassica oleracea Bo5g015210 I
Bo5g043120 Brassica oleracea Bo5g043120 I
Bra011002 Brassica rapa Bra011002 I
Bra019821 Brassica rapa Bra019821 I
Bra024735 Brassica rapa Bra024735 I
Bra026509 Brassica rapa Bra026509 I
Bra026917 Brassica rapa Bra026917 I
Bra038346 Brassica rapa Bra038346 I
BRADI2G02710 Brachypodium distachyon BRADI2G02710 I
BRADI2G02720 Brachypodium distachyon BRADI2G02720 I
BRADI2G47220 Brachypodium distachyon BRADI2G47220 I
RAV2 Arabidopsis lyrata fgenesh2_kg.2__1141__AT1G68840.1 I
EDF3 Arabidopsis lyrata fgenesh2_kg.5__327__AT3G25730.1 I
GLYMA01G22260 Glycine max GLYMA01G22260 I
GLYMA02G11060 Glycine max GLYMA02G11060 I
GLYMA10G34760 Glycine max GLYMA10G34760 I
GLYMA20G32730 Glycine max GLYMA20G32730 I
GRMZM2G059939 Zea mays GRMZM2G059939 I
GRMZM2G159592 Zea mays GRMZM2G159592 I
GRMZM2G169654 Zea mays GRMZM2G169654 I
GSMUA_Achr1G21250_001 Musa acuminata GSMUA_Achr1G21250_001 I
GSMUA_Achr2G22560_001 Musa acuminata GSMUA_Achr2G22560_001 I
GSMUA_Achr3G21100_001 Musa acuminata GSMUA_Achr3G21100_001 I
GSMUA_Achr4G06710_001 Musa acuminata GSMUA_Achr4G06710_001 I
GSMUA_Achr5G09950_001 Musa acuminata GSMUA_Achr5G09950_001 I
GSMUA_Achr8G18260_001 Musa acuminata GSMUA_Achr8G18260_001 I
LPERR01G02360 Leersia perrieri LPERR01G02360 I
LPERR01G02380 Leersia perrieri LPERR01G02380 I
LPERR01G23470 Leersia perrieri LPERR01G23470 I
LPERR05G20600 Leersia perrieri LPERR05G20600 I
MLOC_5512 Hordeum vulgare MLOC_5512 I
MLOC_63261 Hordeum vulgare MLOC_63261 I
MTR_1g093600 Medicago truncatula MTR_1g093600 I
MTR_5g053920 Medicago truncatula MTR_5g053920 I
OB01G12600 Oryza brachyantha OB01G12600 I
OBART01G02610 Oryza barthii OBART01G02610 I
OBART01G27360 Oryza barthii OBART01G27360 I
OGLUM01G02850 Oryza glumaepatula OGLUM01G02850 I
OGLUM01G31260 Oryza glumaepatula OGLUM01G31260 I
OGLUM05G26380 Oryza glumaepatula OGLUM05G26380 I
OMERI01G02480 Oryza meridionalis OMERI01G02480 I
OMERI01G02500 Oryza meridionalis OMERI01G02500 I
OMERI01G25110 Oryza meridionalis OMERI01G25110 I
OMERI05G22110 Oryza meridionalis OMERI05G22110 I
ONIVA01G02970 Oryza nivara ONIVA01G02970 I
ONIVA01G02990 Oryza nivara ONIVA01G02990 I
ONIVA01G31290 Oryza nivara ONIVA01G31290 I
ONIVA05G26000 Oryza nivara ONIVA05G26000 I
OPUNC01G02240 Oryza punctata OPUNC01G02240 I
OPUNC01G27280 Oryza punctata OPUNC01G27280 I
OPUNC05G22370 Oryza punctata OPUNC05G22370 I
ORGLA01G0022400 Oryza glaberrima ORGLA01G0022400 I
ORGLA01G0022600 Oryza glaberrima ORGLA01G0022600 I
ORGLA01G0225300 Oryza glaberrima ORGLA01G0225300 I
ORUFI01G02660 Oryza rufipogon ORUFI01G02660 I
ORUFI01G02680 Oryza rufipogon ORUFI01G02680 I
ORUFI01G30390 Oryza rufipogon ORUFI01G30390 I
OS01G0140700 Oryza sativa OS01G0140700 I
OS01G0141000 Oryza sativa OS01G0141000 I
OS01G0693400 Oryza sativa OS01G0693400 I
OS05G0549800 Oryza sativa OS05G0549800 I
PGSC0003DMG400000811 Solanum tuberosum PGSC0003DMG400000811 I
PGSC0003DMG400007458 Solanum tuberosum PGSC0003DMG400007458 I
POPTR_0008s11600 Populus trichocarpa POPTR_0008s11600 I
POPTR_0010s13930 Populus trichocarpa POPTR_0010s13930 I
PRUPE_ppa006243mg Prunus persica PRUPE_ppa006243mg I
PRUPE_ppa026046mg Prunus persica PRUPE_ppa026046mg I
Sb03g006590 Sorghum bicolor Sb03g006590 I
Sb03g031860 Sorghum bicolor Sb03g031860 I
Sb09g027530 Sorghum bicolor Sb09g027530 I
RAV1 Arabidopsis lyrata scaffold_101479.1 I
TEM1 Arabidopsis lyrata scaffold_102941.1 I
Si001909m.g Setaria italica Si001909m.g I
Si004045m.g Setaria italica Si004045m.g I
Si024576m.g Setaria italica Si024576m.g I
Solyc04g007000.1 Solanum lycopersicum Solyc04g007000.1 I
Solyc05g009790.1 Solanum lycopersicum Solyc05g009790.1 I
TCM_011862 Theobroma cacao TCM_011862 I
TCM_019508 Theobroma cacao TCM_019508 I
TRAES3BF062600010CFD_g Triticum aestivum TRAES3BF062600010CFD_g I
TRAES3BF062700040CFD_g Triticum aestivum TRAES3BF062700040CFD_g I
TRIUR3_27886 Triticum urartu TRIUR3_27886 I
VIT_01s0011g03070 Vitis vinifera VIT_01s0011g03070 I
VIT_14s0083g00130 Vitis vinifera VIT_14s0083g00130 I
Ca_08436 Cicer arietinum Ca_08436 I
Ca_24123 Cicer arietinum Ca_24123 I
Cla020675 Citrullus lanatus Cla020675 I
Pm015500 Prunus mume Pm015500 I
Pm029015 Prunus mume Pm029015 I
29738.m001050 Ricinus communis 29738.m001050 I
cassava12324.valid.m1 Manihot esculenta cassava12324.valid.m1 I
cassava43329.valid.m1 Manihot esculenta cassava43329.valid.m1 I
Cucsa.283870 Cucumis sativus Cucsa.283870 I
mgf019592m Mimulus guttatus mgf019592m I
Aquca_002_01106 Aquilegia coerulea Aquca_002_01106 I
Aquca_026_00225 Aquilegia coerulea Aquca_026_00225 I
Bostr.0556s0243 Boechera stricta Bostr.0556s0243 I
Bostr.10273s0485 Boechera stricta Bostr.10273s0485 I
Bostr.12659s0398 Boechera stricta Bostr.12659s0398 I
Bostr.13671s0120 Boechera stricta Bostr.13671s0120 I
Cagra.1157s0007 Capsella grandiflora Cagra.1157s0007 I
Cagra.3501s0173 Capsella grandiflora Cagra.3501s0173 I
Carubv10009612m.g Capsella rubella Carubv10009612m.g I
Carubv10019207m.g Capsella rubella Carubv10019207m.g I
Carubv10020536m.g Capsella rubella Carubv10020536m.g I
Ciclev10031846m.g Citrus clementina Ciclev10031846m.g I
Eucgr.B03048 Eucalyptus grandis Eucgr.B03048 I
gene03871-v1.0-hybrid Fragaria vesca gene03871-v1.0-hybrid I
Gorai.005G138100 Gossypium raimondii Gorai.005G138100 I
Gorai.008G185900 Gossypium raimondii Gorai.008G185900 I
Gorai.013G080000 Gossypium raimondii Gorai.013G080000 I
Lus10021707.g Linum usitatissimum Lus10021707.g I
Lus10041487.g Linum usitatissimum Lus10041487.g I
MDP0000128924 Malus domestica MDP0000128924 I
MDP0000939633 Malus domestica MDP0000939633 I
MDP0000945267 Malus domestica MDP0000945267 I
orange1.1g017035m.g Citrus sinensis orange1.1g017035m.g I
orange1.1g021945m.g Citrus sinensis orange1.1g021945m.g I
Pavir.Ca01165 Panicum virgatum Pavir.Ca01165 I
Pavir.Ca01826 Panicum virgatum Pavir.Ca01826 I
Pavir.Ea00549 Panicum virgatum Pavir.Ea00549 I
Pavir.Ea02092 Panicum virgatum Pavir.Ea02092 I
Pavir.Eb00702 Panicum virgatum Pavir.Eb00702 I
Pavir.Eb02845 Panicum virgatum Pavir.Eb02845 I
Pavir.J00384 Panicum virgatum Pavir.J00384 I
Pavir.J13012 Panicum virgatum Pavir.J13012 I
Pavir.J23476 Panicum virgatum Pavir.J23476 I
SapurV1A.0079s0450 Salix purpurea SapurV1A.0079s0450 I
SapurV1A.1001s0020 Salix purpurea SapurV1A.1001s0020 I
SapurV1A.3302s0010 Salix purpurea SapurV1A.3302s0010 I
Thhalv10004508m.g Eutrema salsugineum Thhalv10004508m.g I
Thhalv10007983m.g Eutrema salsugineum Thhalv10007983m.g I
Thhalv10010019m.g Eutrema salsugineum Thhalv10010019m.g I
Thhalv10019566m.g Eutrema salsugineum Thhalv10019566m.g I
PK15652.1 Cannabis sativa PK15652.1 I
gene10330-v1.0-hybrid Fragaria vesca gene10330-v1.0-hybrid N
MDP0000153589 Malus domestica MDP0000153589 N
MDP0000321569 Malus domestica MDP0000321569 N