PPAI007797 (Phlebotomus papatasi)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 PPAI007797 T319782_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.825 0.825
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.825 0.825
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.825 0.825
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.825 0.825
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.725 0.725
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.725 0.725
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.725 0.725
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.725 0.725
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.725 0.725
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR

YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.725 0.725
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.725 0.725
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.725 0.725
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.725 0.725
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.725 0.725
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.725 0.725
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.725 0.725
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.725 0.725
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.700 0.700
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.700 0.700
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.700 0.700
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.700 0.700
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.700 0.700
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.700 0.700
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.700 0.700
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.700 0.700
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.700 0.700
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.700 0.700
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.700 0.700
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.700 0.700
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.700 0.700
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.700 0.700
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.700 0.700
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.700 0.700
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.700 0.700
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.700 0.700
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.700 0.700
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.700 0.700
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.700 0.700
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.700 0.700
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.700 0.700
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPAI007797-PA Runt 2 41

Links

Other Runt family TFs
Other Phlebotomus papatasi TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_1AL_9ADA7A031 Triticum aestivum Traes_1AL_9ADA7A031 I
OPUNC01G28510 Oryza punctata OPUNC01G28510 I
OPUNC05G21470 Oryza punctata OPUNC05G21470 I
ORGLA01G0238400 Oryza glaberrima ORGLA01G0238400 I
ORUFI01G31840 Oryza rufipogon ORUFI01G31840 I
ORUFI05G25660 Oryza rufipogon ORUFI05G25660 I
OS01G0714800 Oryza sativa OS01G0714800 I
OS05G0537100 Oryza sativa OS05G0537100 I
Sb03g032800 Sorghum bicolor Sb03g032800 I
Sb09g026830 Sorghum bicolor Sb09g026830 I
Si004464m.g Setaria italica Si004464m.g I
Si023194m.g Setaria italica Si023194m.g I
ONIVA05G24830 Oryza nivara ONIVA05G24830 I
Traes_1DL_D550418641 Triticum aestivum Traes_1DL_D550418641 I
TRAES3BF111700140CFD_g Triticum aestivum TRAES3BF111700140CFD_g I
Traes_3DL_DF0D3F3FE Triticum aestivum Traes_3DL_DF0D3F3FE I
TRIUR3_01979 Triticum urartu TRIUR3_01979 I
TRIUR3_33662 Triticum urartu TRIUR3_33662 I
Ciclev10026733m.g Citrus clementina Ciclev10026733m.g I
orange1.1g029257m.g Citrus sinensis orange1.1g029257m.g I
Pavir.Ca01747 Panicum virgatum Pavir.Ca01747 I
Pavir.Ea02619 Panicum virgatum Pavir.Ea02619 I
Pavir.Eb02766 Panicum virgatum Pavir.Eb02766 I
Pavir.J03284 Panicum virgatum Pavir.J03284 I
MLOC_10264 Hordeum vulgare MLOC_10264 I
BGIOSGA020266 Oryza indica BGIOSGA020266 I
BRADI2G18530 Brachypodium distachyon BRADI2G18530 I
F775_44085 Aegilops tauschii F775_44085 I
F775_52480 Aegilops tauschii F775_52480 I
GRMZM2G101405 Zea mays GRMZM2G101405 I
GRMZM2G137802 Zea mays GRMZM2G137802 I
GRMZM5G863420 Zea mays GRMZM5G863420 I
GSMUA_Achr3G20450_001 Musa acuminata GSMUA_Achr3G20450_001 I
GSMUA_Achr7G09680_001 Musa acuminata GSMUA_Achr7G09680_001 I
LPERR01G24650 Leersia perrieri LPERR01G24650 I
LPERR05G19900 Leersia perrieri LPERR05G19900 I
BGIOSGA000921 Oryza indica BGIOSGA000921 I
MLOC_81131 Hordeum vulgare MLOC_81131 I
OB01G37710 Oryza brachyantha OB01G37710 I
OB05G31630 Oryza brachyantha OB05G31630 I
OBART01G28750 Oryza barthii OBART01G28750 I
OBART01G28780 Oryza barthii OBART01G28780 I
OBART05G24090 Oryza barthii OBART05G24090 I
OGLUM01G32750 Oryza glumaepatula OGLUM01G32750 I
OMERI01G26280 Oryza meridionalis OMERI01G26280 I
OMERI01G26720 Oryza meridionalis OMERI01G26720 I
ONIVA01G32840 Oryza nivara ONIVA01G32840 N