MTR_0140s0010 (Medicago truncatula)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MTR_0140s0010 T320539_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.850 0.850
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.850 0.850
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH16582 RWP-RK 148 167

Links

Other RWP-RK family TFs
Other Medicago truncatula TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.850
RKD1 Arabidopsis thaliana AT1G18790 I 0.800
fgenesh2_kg.1__2057__AT1G18790.1 Arabidopsis lyrata fgenesh2_kg.1__2057__AT1G18790.1 I 0.800
Lus10019100.g Linum usitatissimum Lus10019100.g I 0.800
Lus10034456.g Linum usitatissimum Lus10034456.g I 0.800
MDP0000266172 Malus domestica MDP0000266172 I 0.800
Thhalv10005560m.g Eutrema salsugineum Thhalv10005560m.g N 0.800
PDK_20s1383532g001 Phoenix dactylifera PDK_20s1383532g001 I 0.800
RKD4 Arabidopsis thaliana AT5G53040 N 0.750
Bo7g064180 Brassica oleracea Bo7g064180 I 0.750
Bra012122 Brassica rapa Bra012122 I 0.750
GLYMA04G33516 Glycine max GLYMA04G33516 I 0.750
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.700
Si005102m.g Setaria italica Si005102m.g N 0.700
Si012648m.g Setaria italica Si012648m.g N 0.700
cassava26650.m1 Manihot esculenta cassava26650.m1 N 0.700
fgenesh1_pg.C_scaffold_13000154 Micromonas pusilla fgenesh1_pg.C_scaffold_13000154 N 0.700
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N 0.700
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N 0.700
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.700