CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI5G09140
(
Brachypodium distachyon
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04689 (S1FA)
IPR006779
BRADI5G09140
T321359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI5G09140.1
S1FA
15
80
EEANKGLNPGMIVLLVVATFLLLFFVGNYALYLYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE
BRADI5G09140.2
S1FA
15
80
EEANKGLNPGMIVLLVVATFLLLFFVGNYALYLYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE
Links
Other
S1FA
family TFs
Other
Brachypodium distachyon
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_67411
Hordeum vulgare
MLOC_67411
N
0.985
Traes_2AL_65586C538
Triticum aestivum
Traes_2AL_65586C538
N
0.970
Traes_2BL_26A5F9082
Triticum aestivum
Traes_2BL_26A5F9082
N
0.970
Traes_2DL_032C7FC8C
Triticum aestivum
Traes_2DL_032C7FC8C
N
0.970
Si011030m.g
Setaria italica
Si011030m.g
N
0.955
Pavir.Gb01773
Panicum virgatum
Pavir.Gb01773
N
0.955
GRMZM2G056929
Zea mays
GRMZM2G056929
N
0.929
BGIOSGA015143
Oryza indica
BGIOSGA015143
N
0.924
GRMZM2G147424
Zea mays
GRMZM2G147424
N
0.924
OB04G18770
Oryza brachyantha
OB04G18770
I
0.924
OB04G18780
Oryza brachyantha
OB04G18780
I
0.924
OBART04G11650
Oryza barthii
OBART04G11650
N
0.924
OGLUM04G11330
Oryza glumaepatula
OGLUM04G11330
N
0.924
ONIVA04G09610
Oryza nivara
ONIVA04G09610
N
0.924
ORGLA04G0086600
Oryza glaberrima
ORGLA04G0086600
N
0.924
ORUFI04G12840
Oryza rufipogon
ORUFI04G12840
N
0.924
S1FA2
Oryza sativa
OS04G0408700
N
0.924
Sb06g015340
Sorghum bicolor
Sb06g015340
N
0.924
Pavir.Ga01929
Panicum virgatum
Pavir.Ga01929
N
0.924
BGIOSGA015142
Oryza indica
BGIOSGA015142
N
0.909
BGIOSGA015145
Oryza indica
BGIOSGA015145
N
0.909
LPERR04G08400
Leersia perrieri
LPERR04G08400
N
0.909
OBART04G11660
Oryza barthii
OBART04G11660
N
0.909
OGLUM04G11340
Oryza glumaepatula
OGLUM04G11340
N
0.909
OMERI04G10270
Oryza meridionalis
OMERI04G10270
N
0.909
OMERI04G10280
Oryza meridionalis
OMERI04G10280
N
0.909
ONIVA04G09620
Oryza nivara
ONIVA04G09620
N
0.909
OPUNC04G09660
Oryza punctata
OPUNC04G09660
N
0.909
ORGLA04G0086800
Oryza glaberrima
ORGLA04G0086800
N
0.909
ORUFI04G12850
Oryza rufipogon
ORUFI04G12850
N
0.909
OS04G0408900
Oryza sativa
OS04G0408900
N
0.909
LPERR04G08410
Leersia perrieri
LPERR04G08410
I
0.879
GSMUA_Achr10G13120_001
Musa acuminata
GSMUA_Achr10G13120_001
I
0.833
Aquca_027_00077
Aquilegia coerulea
Aquca_027_00077
I
0.803
S1FA1
Arabidopsis thaliana
AT3G53370
I
0.794
OPUNC04G09650
Oryza punctata
OPUNC04G09650
I
0.788
Gorai.006G168100
Gossypium raimondii
Gorai.006G168100
I
0.788
PRUPE_ppa014157mg
Prunus persica
PRUPE_ppa014157mg
N
0.773
TCM_022113
Theobroma cacao
TCM_022113
I
0.773
Pm002519
Prunus mume
Pm002519
N
0.773
Eucgr.A01168
Eucalyptus grandis
Eucgr.A01168
I
0.773
MDP0000276000
Malus domestica
MDP0000276000
N
0.773
GSMUA_Achr6G23400_001
Musa acuminata
GSMUA_Achr6G23400_001
N
0.758
Cla018106
Citrullus lanatus
Cla018106
I
0.758
Cla018556
Citrullus lanatus
Cla018556
I
0.758
Cucsa.124240
Cucumis sativus
Cucsa.124240
I
0.758
Cucsa.307040
Cucumis sativus
Cucsa.307040
I
0.758
AMTR_s00052p00202630
Amborella trichopoda
AMTR_s00052p00202630
I
0.742
Solyc09g007500.2
Solanum lycopersicum
Solyc09g007500.2
I
0.742
VIT_06s0004g03160
Vitis vinifera
VIT_06s0004g03160
I
0.742
Ciclev10013218m.g
Citrus clementina
Ciclev10013218m.g
I
0.742
gene09647-v1.0-hybrid
Fragaria vesca
gene09647-v1.0-hybrid
N
0.742
Gorai.002G249300
Gossypium raimondii
Gorai.002G249300
I
0.742
orange1.1g044991m.g
Citrus sinensis
orange1.1g044991m.g
I
0.742
SapurV1A.0112s0080
Salix purpurea
SapurV1A.0112s0080
I
0.742
SapurV1A.0209s0130
Salix purpurea
SapurV1A.0209s0130
I
0.742
fgenesh1_pm.C_scaffold_5001425
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001425
I
0.727
GLYMA03G33640
Glycine max
GLYMA03G33640
I
0.727
GSMUA_Achr3G17900_001
Musa acuminata
GSMUA_Achr3G17900_001
N
0.727
PGSC0003DMG400001772
Solanum tuberosum
PGSC0003DMG400001772
I
0.727
POPTR_0016s08890
Populus trichocarpa
POPTR_0016s08890
I
0.727
mgf000337m
Mimulus guttatus
mgf000337m
I
0.727
evm.TU.supercontig_638.2
Carica papaya
evm.TU.supercontig_638.2
I
0.727
Gorai.009G419300
Gossypium raimondii
Gorai.009G419300
I
0.727
Lus10015073.g
Linum usitatissimum
Lus10015073.g
I
0.727
Lus10023177.g
Linum usitatissimum
Lus10023177.g
I
0.727
chr1.CM0033.550.nc
Lotus japonicus
chr1.CM0033.550.nc
I
0.727
Bo6g067310
Brassica oleracea
Bo6g067310
I
0.712
Bra003132
Brassica rapa
Bra003132
I
0.712
GLYMA19G36350
Glycine max
GLYMA19G36350
I
0.712
POPTR_0006s13230
Populus trichocarpa
POPTR_0006s13230
I
0.712
scaffold_402348.1
Arabidopsis lyrata
scaffold_402348.1
I
0.712
VIT_08s0040g02220
Vitis vinifera
VIT_08s0040g02220
I
0.712
29805.m001471
Ricinus communis
29805.m001471
I
0.712
cassava45931.m1
Manihot esculenta
cassava45931.m1
I
0.712
Cagra.0612s0062
Capsella grandiflora
Cagra.0612s0062
I
0.712
Carubv10018341m.g
Capsella rubella
Carubv10018341m.g
I
0.712
Thhalv10017496m.g
Eutrema salsugineum
Thhalv10017496m.g
I
0.712