CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00003p00264810
(
Amborella trichopoda
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
AMTR_s00003p00264810
T321560_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN03441
SAND
36
125
REREYIEVTCGCTSFRYGDAAGKLRVFVRGDLEISCECTPGCEEDKLTPSAFEKHAGRETRKWKNNIWVIMSGEKVPLAKTVLLKYYNEA
Links
Other
SAND
family TFs
Other
Amborella trichopoda
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm015354
Prunus mume
Pm015354
N
0.952
PRUPE_ppa017439mg
Prunus persica
PRUPE_ppa017439mg
N
0.950
MDP0000237588
Malus domestica
MDP0000237588
N
0.950
MDP0000315130
Malus domestica
MDP0000315130
N
0.950
Ca_19014
Cicer arietinum
Ca_19014
N
0.946
cassava12533.valid.m1
Manihot esculenta
cassava12533.valid.m1
N
0.943
POPTR_0019s13550
Populus trichocarpa
POPTR_0019s13550
N
0.930
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
0.924
TCM_007971
Theobroma cacao
TCM_007971
N
0.920
VIT_12s0059g01980
Vitis vinifera
VIT_12s0059g01980
N
0.917
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
0.900
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
0.900
POPTR_0013s14170
Populus trichocarpa
POPTR_0013s14170
N
0.886
gene10278-v1.0-hybrid
Fragaria vesca
gene10278-v1.0-hybrid
N
0.882
Gorai.008G152400
Gossypium raimondii
Gorai.008G152400
N
0.848