CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ULT1
(
Arabidopsis thaliana
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
AT4G28190
T321564_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G28190.1
SAND
32
113
YVEVMCGCTSHRYGDAVARLRVFPTGDLEITCECTPGCDEDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLK
AT4G28190.2
SAND
97
146
FDCMMLDKLTPAAFEKHSGRETARKWKNNVWVIIGGEKVPLSKTVLLKYY
Links
Other
SAND
family TFs
Other
Arabidopsis thaliana
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra024219
Brassica rapa
Bra024219
N
0.988
Bo1g051270
Brassica oleracea
Bo1g051270
N
0.961
Bostr.7867s0654
Boechera stricta
Bostr.7867s0654
N
0.961
Cagra.1225s0078
Capsella grandiflora
Cagra.1225s0078
N
0.961
Carubv10005638m.g
Capsella rubella
Carubv10005638m.g
N
0.961
ULT1
Arabidopsis lyrata
fgenesh2_kg.7__1389__AT4G28190.1
N
0.956
Bo7g111950
Brassica oleracea
Bo7g111950
N
0.954
Bra026276
Brassica rapa
Bra026276
N
0.954
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
0.918
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
0.918
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
0.916
chr3.CM0468.20.nd
Lotus japonicus
chr3.CM0468.20.nd
N
0.913
PGSC0003DMG400018322
Solanum tuberosum
PGSC0003DMG400018322
N
0.908
Thhalv10026038m.g
Eutrema salsugineum
Thhalv10026038m.g
N
0.908
Solyc07g054450.2
Solanum lycopersicum
Solyc07g054450.2
N
0.903
GLYMA12G11800
Glycine max
GLYMA12G11800
N
0.896
GLYMA06G45180
Glycine max
GLYMA06G45180
N
0.893
cassava18740.valid.m1
Manihot esculenta
cassava18740.valid.m1
N
0.893
MTR_2g090080
Medicago truncatula
MTR_2g090080
N
0.880
TRIUR3_18055
Triticum urartu
TRIUR3_18055
N
0.870
chr3.CM0711.550.nd
Lotus japonicus
chr3.CM0711.550.nd
N
0.865