CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA000702
(
Oryza indica
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
BGIOSGA000702
T321566_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA000702-PA
SAND
26
111
RCEDFVEVTCGCTSHRYGDAVGRLRVYASGDLEVSCECTPGCREDKLTPSAFEKHSGRETAGKWRNTVWVMVQGEKVPLSKTALLK
Links
Other
SAND
family TFs
Other
Oryza indica
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR01G28620
Leersia perrieri
LPERR01G28620
N
0.994
OB01G42000
Oryza brachyantha
OB01G42000
N
0.994
OBART01G33150
Oryza barthii
OBART01G33150
N
0.994
OGLUM01G37340
Oryza glumaepatula
OGLUM01G37340
N
0.994
OLONG_014986
Oryza longistaminata
OLONG_014986
N
0.994
OMERI01G30050
Oryza meridionalis
OMERI01G30050
N
0.994
ONIVA01G37460
Oryza nivara
ONIVA01G37460
N
0.994
ORGLA01G0271200
Oryza glaberrima
ORGLA01G0271200
N
0.994
ORUFI01G36290
Oryza rufipogon
ORUFI01G36290
N
0.994
OS01G0780800
Oryza sativa
OS01G0780800
N
0.994
Sb03g036430
Sorghum bicolor
Sb03g036430
N
0.982
GRMZM2G082745
Zea mays
GRMZM2G082745
N
0.979
Pavir.Eb03405
Panicum virgatum
Pavir.Eb03405
N
0.979
Si002762m.g
Setaria italica
Si002762m.g
N
0.976
GRMZM2G004690
Zea mays
GRMZM2G004690
N
0.969
OPUNC01G32160
Oryza punctata
OPUNC01G32160
N
0.966
GSMUA_AchrUn_randomG13850_001
Musa acuminata
GSMUA_AchrUn_randomG13850_001
N
0.958
GSMUA_Achr2G02900_001
Musa acuminata
GSMUA_Achr2G02900_001
N
0.956
BRADI2G51790
Brachypodium distachyon
BRADI2G51790
N
0.948
GSMUA_Achr1G08820_001
Musa acuminata
GSMUA_Achr1G08820_001
N
0.945
Eucgr.K00939
Eucalyptus grandis
Eucgr.K00939
N
0.940
Gorai.005G204800
Gossypium raimondii
Gorai.005G204800
N
0.939
29983.m003255
Ricinus communis
29983.m003255
N
0.916
Lus10018560.g
Linum usitatissimum
Lus10018560.g
N
0.907
Lus10039791.g
Linum usitatissimum
Lus10039791.g
N
0.904
MDP0000089136
Malus domestica
MDP0000089136
N
0.903
Cla007849
Citrullus lanatus
Cla007849
N
0.889
Cucsa.147930
Cucumis sativus
Cucsa.147930
N
0.889
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
0.889
OB05G29560
Oryza brachyantha
OB05G29560
N
0.881
Aquca_102_00032
Aquilegia coerulea
Aquca_102_00032
N
0.878
MLOC_64866
Hordeum vulgare
MLOC_64866
N
0.862
LPERR05G17860
Leersia perrieri
LPERR05G17860
N
0.861
Aquca_008_00040
Aquilegia coerulea
Aquca_008_00040
N
0.847