CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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deaf1
(
Tetraodon nigroviridis
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
ENSTNIG00000016068
T321932_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DEAF1
M11266_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_01
0.955
0.789
DEAF1
M11267_2.00
Pan troglodytes
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEAF1_02
0.955
0.789
For this family, TFs with SR scores >
0.843
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000002355
SAND
145
220
SVYNNELPVRCRNTSGVLYKNRLGSGGKGRCIRHSQQWFSPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERIL
ENSTNIP00000019158
SAND
145
220
SVYNNELPVRCRNTSGVLYKNRLGSGGKGRCIRHSQQWFSPTEFEGLAGRASSKDWKRSIRYAGRPLLCLIQERIL
Links
Other
SAND
family TFs
Other
Tetraodon nigroviridis
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000003936
Oreochromis niloticus
ENSONIG00000003936
I
0.992
deaf1
Takifugu rubripes
ENSTRUG00000002931
I
0.991
deaf1
Gasterosteus aculeatus
ENSGACG00000008942
I
0.990
ENSPFOG00000014257
Poecilia formosa
ENSPFOG00000014257
I
0.990
ENSXMAG00000013352
Xiphophorus maculatus
ENSXMAG00000013352
I
0.990
deaf1
Oryzias latipes
ENSORLG00000019407
I
0.988
ENSGMOG00000000222
Gadus morhua
ENSGMOG00000000222
I
0.983
deaf1
Danio rerio
ENSDARG00000088844
I
0.981
ENSAMXG00000016516
Astyanax mexicanus
ENSAMXG00000016516
I
0.978
ENSLOCG00000002360
Lepisosteus oculatus
ENSLOCG00000002360
I
0.976
ENSLACG00000014207
Latimeria chalumnae
ENSLACG00000014207
I
0.967
ENSAPLG00000011215
Anas platyrhynchos
ENSAPLG00000011215
I
0.958
ENSFALG00000010923
Ficedula albicollis
ENSFALG00000010923
I
0.958
ENSGALG00000005089
Gallus gallus
ENSGALG00000005089
I
0.958
DEAF1
Meleagris gallopavo
ENSMGAG00000003765
I
0.958
DEAF1
Taeniopygia guttata
ENSTGUG00000007185
I
0.958
Aan_R010721
Calypte anna
Aan_R010721
I
0.958
Afo_R011879
Aptenodytes forsteri
Afo_R011879
I
0.958
Alligator_sinensis_CCG021031.1
Alligator sinensis
Alligator_sinensis_CCG021031.1
I
0.958
Gfo_R011899
Geospiza fortis
Gfo_R011899
I
0.958
Ogr05554
Ophisaurus gracilis
Ogr05554
I
0.958
Pvit_08245
Pogona vitticeps
Pvit_08245
I
0.958
DEAF1
Anolis carolinensis
ENSACAG00000015102
I
0.955
ENSCSAG00000010763
Chlorocebus sabaeus
ENSCSAG00000010763
I
0.955
DEAF1
Equus caballus
ENSECAG00000010151
I
0.955
DEAF1
Homo sapiens
ENSG00000177030
I
0.955
DEAF1
Gorilla gorilla
ENSGGOG00000014020
I
0.955
DEAF1
Myotis lucifugus
ENSMLUG00000026576
I
0.955
DEAF1
Macaca mulatta
ENSMMUG00000002660
I
0.955
ENSNLEG00000008479
Nomascus leucogenys
ENSNLEG00000008479
I
0.955
ENSPANG00000008597
Papio anubis
ENSPANG00000008597
I
0.955
DEAF1
Pan troglodytes
ENSPTRG00000003129
D
0.955
ENSP00000371846
Macaca fascicularis
ENSP00000371846
I
0.955
Myotis_brandtii_DEAF1_10008461
Myotis brandtii
Myotis_brandtii_DEAF1_10008461
I
0.955
ENSMEUG00000005016
Macropus eugenii
ENSMEUG00000005016
I
0.952
ENSSHAG00000002042
Sarcophilus harrisii
ENSSHAG00000002042
I
0.952
deaf1
Xenopus tropicalis
XB-GENE-1216227
I
0.950
DEAF1
Callithrix jacchus
ENSCJAG00000011996
I
0.949
DEAF1
Cavia porcellus
ENSCPOG00000006073
I
0.949
Deaf1
Dipodomys ordii
ENSDORG00000015737
I
0.949
DEAF1
Loxodonta africana
ENSLAFG00000023242
I
0.949
Deaf1
Mus musculus
ENSMUSG00000058886
I
0.949
ENSOARG00000006285
Ovis aries
ENSOARG00000006285
I
0.949
DEAF1
Otolemur garnettii
ENSOGAG00000006434
I
0.949
ENSPSIG00000016545
Pelodiscus sinensis
ENSPSIG00000016545
I
0.949
Deaf1
Rattus norvegicus
ENSRNOG00000017960
I
0.949
ENSSTOG00000004165
Ictidomys tridecemlineatus
ENSSTOG00000004165
I
0.949
DEAF1
Tursiops truncatus
ENSTTRG00000015418
I
0.949
Cmyd_10004045
Chelonia mydas
Cmyd_10004045
I
0.949
ENSP00000371846-D1
Bos grunniens
ENSP00000371846-D1
I
0.949
ENSAMEG00000010672
Ailuropoda melanoleuca
ENSAMEG00000010672
I
0.947
DEAF1
Canis familiaris
ENSCAFG00000006569
I
0.947
DEAF1
Dasypus novemcinctus
ENSDNOG00000000274
I
0.947
DEAF1
Felis catus
ENSFCAG00000007591
I
0.947
ENSMPUG00000008992
Mustela putorius furo
ENSMPUG00000008992
I
0.947
ENSOPRG00000002240
Ochotona princeps
ENSOPRG00000002240
I
0.947
DEAF1
Pteropus vampyrus
ENSPVAG00000006883
I
0.947
DEAF1
Sus scrofa
ENSSSCG00000012850
I
0.947
DEAF1
Microcebus murinus
ENSMICG00000001602
I
0.943
ENSPMAG00000004264
Petromyzon marinus
ENSPMAG00000004264
I
0.943
CapteG228571
Capitella teleta
CapteG228571
I
0.898
Brh_R009745
Buceros rhinoceros
Brh_R009745
I
0.895
TC000085
Tribolium castaneum
TC000085
I
0.860
Ocbimv22013386m.g
Octopus bimaculoides
Ocbimv22013386m.g
I
0.858
CGI_10012910
Crassostrea gigas
CGI_10012910
I
0.857
L798_01684
Zootermopsis nevadensis
L798_01684
I
0.856
SMAR003119
Strigamia maritima
SMAR003119
I
0.854
GB41654
Apis mellifera
GB41654
I
0.851
MCINX013640
Melitaea cinxia
MCINX013640
I
0.849
HMEL013517
Heliconius melpomene
HMEL013517
I
0.845
KGM_18605
Danaus plexippus
KGM_18605
I
0.845
YQE_06816
Dendroctonus ponderosae
YQE_06816
I
0.845
LDEC013410
Leptinotarsa decemlineata
LDEC013410
I
0.845
BGLB009094
Biomphalaria glabrata
BGLB009094
I
0.845