CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR06G23780
(
Leersia perrieri
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
LPERR06G23780
T322011_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR06G23780.2
SAND
199
240
VLRGVIKRLGILCSCSSCKGRNVVSPYYFEVHAGSTKKHPSD
LPERR06G23780.4
SAND
199
240
VLRGVIKRLGILCSCSSCKGRNVVSPYYFEVHAGSTKKHPSD
LPERR06G23780.4
SAND
370
430
GLHKLVFMSGVLPEGTDVGYYVGGKVSPSQFEAHAGRAARRKPYHNIYMSNGVSLHELSVS
Links
Other
SAND
family TFs
Other
Leersia perrieri
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI06G30250
Oryza rufipogon
ORUFI06G30250
N
0.993
OB06G36080
Oryza brachyantha
OB06G36080
N
0.974
OBART06G28330
Oryza barthii
OBART06G28330
N
0.974
OGLUM06G29720
Oryza glumaepatula
OGLUM06G29720
N
0.974
OLONG_013922
Oryza longistaminata
OLONG_013922
N
0.974
ONIVA06G31450
Oryza nivara
ONIVA06G31450
N
0.974
ORGLA06G0289000
Oryza glaberrima
ORGLA06G0289000
N
0.974
Pavir.J04848
Panicum virgatum
Pavir.J04848
N
0.970
TRIUR3_00440
Triticum urartu
TRIUR3_00440
N
0.957
Si005834m.g
Setaria italica
Si005834m.g
N
0.946
GRMZM2G387485
Zea mays
GRMZM2G387485
N
0.945
Traes_7AL_153E1A74A
Triticum aestivum
Traes_7AL_153E1A74A
N
0.928
Pavir.Db00082
Panicum virgatum
Pavir.Db00082
N
0.897