CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_2g090080
(
Medicago truncatula
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
MTR_2g090080
T322020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH39074
SAND
29
118
GECVEVMCGCTSHRYGDAVGRLRVFVNGYLEITCECIPGCEEDKLTPAAFEKHSGRETARKWKNNIWVIVDGEKVPLYKTVLLKYYNQAL
Links
Other
SAND
family TFs
Other
Medicago truncatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr3.CM0711.550.nd
Lotus japonicus
chr3.CM0711.550.nd
N
0.965
GLYMA06G45180
Glycine max
GLYMA06G45180
N
0.940
GLYMA12G11800
Glycine max
GLYMA12G11800
N
0.938
Bo7g111950
Brassica oleracea
Bo7g111950
N
0.932
Bostr.7867s0654
Boechera stricta
Bostr.7867s0654
N
0.920
cassava18740.valid.m1
Manihot esculenta
cassava18740.valid.m1
N
0.919
Cagra.1225s0078
Capsella grandiflora
Cagra.1225s0078
N
0.914
Carubv10005638m.g
Capsella rubella
Carubv10005638m.g
N
0.900
Bo1g051270
Brassica oleracea
Bo1g051270
N
0.898
Bra024219
Brassica rapa
Bra024219
N
0.882
Bra026276
Brassica rapa
Bra026276
N
0.882
ULT1
Arabidopsis thaliana
AT4G28190
N
0.880
PGSC0003DMG400018322
Solanum tuberosum
PGSC0003DMG400018322
N
0.879
Solyc07g054450.2
Solanum lycopersicum
Solyc07g054450.2
N
0.871
ULT1
Arabidopsis lyrata
fgenesh2_kg.7__1389__AT4G28190.1
N
0.869
Cagra.20132s0010
Capsella grandiflora
Cagra.20132s0010
N
0.864
Bostr.7903s0074
Boechera stricta
Bostr.7903s0074
N
0.863
Bo00902s070
Brassica oleracea
Bo00902s070
N
0.848
Bra036504
Brassica rapa
Bra036504
N
0.845