CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_013922
(
Oryza longistaminata
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
OLONG_013922
T322038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_013922-R1
SAND
186
227
VLRGVIKRVGILCSCSSCKGRTVVSPYYFEVHAGSTKKHPSD
OLONG_013922-R1
SAND
381
437
KRLLDGYIKEFGIYCHCCNTVVSPSQFEAHAGRAARRKPYHNIYMSNGVSLHELSVS
OLONG_013922-R2
SAND
186
227
VLRGVIKRVGILCSCSSCKGRTVVSPYYFEVHAGSTKKHPSD
OLONG_013922-R2
SAND
381
437
KRLLDGYIKEFGIYCHCCNTVVSPSQFEAHAGRAARRKPYHNIYMSNGVSLHELSVS
Links
Other
SAND
family TFs
Other
Oryza longistaminata
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART06G28330
Oryza barthii
OBART06G28330
N
0.994
OGLUM06G29720
Oryza glumaepatula
OGLUM06G29720
N
0.994
ONIVA06G31450
Oryza nivara
ONIVA06G31450
N
0.994
ORGLA06G0289000
Oryza glaberrima
ORGLA06G0289000
N
0.994
OB06G36080
Oryza brachyantha
OB06G36080
N
0.993
Pavir.J04848
Panicum virgatum
Pavir.J04848
N
0.992
GRMZM2G387485
Zea mays
GRMZM2G387485
N
0.985
Si005834m.g
Setaria italica
Si005834m.g
N
0.981
Traes_7AL_153E1A74A
Triticum aestivum
Traes_7AL_153E1A74A
N
0.976
LPERR06G23780
Leersia perrieri
LPERR06G23780
N
0.974
ORUFI06G30250
Oryza rufipogon
ORUFI06G30250
N
0.974
Pavir.Db00082
Panicum virgatum
Pavir.Db00082
N
0.971