Lus10039791.g (Linum usitatissimum)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Lus10039791.g T322259_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10039791 SAND 43 133

Links

Other SAND family TFs
Other Linum usitatissimum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.994
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.989
29983.m003255 Ricinus communis 29983.m003255 N 0.985
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.985
MDP0000089136 Malus domestica MDP0000089136 N 0.981
Cla007849 Citrullus lanatus Cla007849 N 0.973
Cucsa.147930 Cucumis sativus Cucsa.147930 N 0.973
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.963
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.962
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N 0.954
PK16281.1 Cannabis sativa PK16281.1 N 0.954
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N 0.953
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.952
MDP0000237588 Malus domestica MDP0000237588 N 0.949
MDP0000315130 Malus domestica MDP0000315130 N 0.949
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N 0.946
Pm015354 Prunus mume Pm015354 N 0.946
TCM_007971 Theobroma cacao TCM_007971 N 0.945
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N 0.942
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N 0.941
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N 0.941
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.938
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.934
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N 0.930
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N 0.930
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.926
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N 0.918
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.917
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N 0.907
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.904
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.904
OB01G42000 Oryza brachyantha OB01G42000 N 0.904
OBART01G33150 Oryza barthii OBART01G33150 N 0.904
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.904
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.904
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.904
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.904
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.904
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.904
OS01G0780800 Oryza sativa OS01G0780800 N 0.904
Aquca_102_00032 Aquilegia coerulea Aquca_102_00032 N 0.874
Ca_19014 Cicer arietinum Ca_19014 N 0.862
Si002762m.g Setaria italica Si002762m.g N 0.851
Pavir.Eb03405 Panicum virgatum Pavir.Eb03405 N 0.851
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N 0.847
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N 0.845