Bo6g108620 (Brassica oleracea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bo6g108620 T322446_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g108620.1 SBP 85 159

Links

Other SBP family TFs
Other Brassica oleracea TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra004363 Brassica rapa Bra004363 N 0.985
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.971
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.971
Pm030597 Prunus mume Pm030597 I 0.971
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.970
MDP0000171877 Malus domestica MDP0000171877 I 0.967
MDP0000246046 Malus domestica MDP0000246046 I 0.967
SPL6 Arabidopsis thaliana AT1G69170 I 0.966
Bra038324 Brassica rapa Bra038324 I 0.964
Bo2g062840 Brassica oleracea Bo2g062840 I 0.963
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.962
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.962
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.959
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.959
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.959
MDP0000119458 Malus domestica MDP0000119458 I 0.956
MDP0000193702 Malus domestica MDP0000193702 I 0.956
Ca_24655 Cicer arietinum Ca_24655 I 0.945
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.940
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.940
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.940
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.940
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.939
MDP0000589558 Malus domestica MDP0000589558 I 0.939
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.939
TCM_011483 Theobroma cacao TCM_011483 I 0.935
Pm025028 Prunus mume Pm025028 I 0.935
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.929
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N 0.929
SapurV1A.0382s0120 Salix purpurea SapurV1A.0382s0120 I 0.929
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.928
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.928
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.928
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.927
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.926
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.924
PK03565.1 Cannabis sativa PK03565.1 I 0.924
F775_02791 Aegilops tauschii F775_02791 I 0.922
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.922
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.922
Si026656m.g Setaria italica Si026656m.g I 0.922
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.922
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.922
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.922
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.921
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.921
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.919
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.919
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.919
Si010262m.g Setaria italica Si010262m.g I 0.918
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.915
SPL19 Oryza sativa OS11G0496600 I 0.915
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.915
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.914
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.913
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.913
Cla019331 Citrullus lanatus Cla019331 I 0.913
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.913
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.913
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.913
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.911
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.911
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.911
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.911
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.911
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.911
TCM_014330 Theobroma cacao TCM_014330 I 0.911
Ca_19449 Cicer arietinum Ca_19449 I 0.911
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.911
30138.m003942 Ricinus communis 30138.m003942 I 0.910
30174.m009082 Ricinus communis 30174.m009082 I 0.910
MDP0000146640 Malus domestica MDP0000146640 I 0.910
MDP0000778465 Malus domestica MDP0000778465 I 0.910
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I 0.909
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.907
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.907
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.907
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.906
Cla018827 Citrullus lanatus Cla018827 I 0.906
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.905
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.905
Sb06g024630 Sorghum bicolor Sb06g024630 I 0.904
PK17790.1 Cannabis sativa PK17790.1 I 0.904
SPL9 Arabidopsis lyrata scaffold_403069.1 I 0.903
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.903
Cagra.2636s0004 Capsella grandiflora Cagra.2636s0004 I 0.903
Carubv10023478m.g Capsella rubella Carubv10023478m.g I 0.903
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.903
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.902
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.902
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.902
Pm007035 Prunus mume Pm007035 I 0.901
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.901
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.901
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.900
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.899
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.899
Pm002693 Prunus mume Pm002693 I 0.899
MDP0000297978 Malus domestica MDP0000297978 I 0.899
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.898
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.897
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.897
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.896
Cla021411 Citrullus lanatus Cla021411 I 0.896
MLOC_13032 Hordeum vulgare MLOC_13032 I 0.895
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.895
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I 0.895
TRIUR3_23102 Triticum urartu TRIUR3_23102 I 0.895
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.894
Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I 0.894
Thhalv10016816m.g Eutrema salsugineum Thhalv10016816m.g I 0.894
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.893
Bo4g015800 Brassica oleracea Bo4g015800 I 0.891
Bra004674 Brassica rapa Bra004674 I 0.891
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I 0.889
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.889
Si001804m.g Setaria italica Si001804m.g I 0.889
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.889
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.889
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I 0.888
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.888
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.887
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.887
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.887
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I 0.887
OB04G27960 Oryza brachyantha OB04G27960 I 0.887
OBART04G20940 Oryza barthii OBART04G20940 I 0.887
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.887
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.887
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.887
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.887
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.887
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.887
SPL7 Oryza sativa OS04G0551500 I 0.887
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.887
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.887
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.887
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.887
LjSGA_121222.1 Lotus japonicus LjSGA_121222.1 I 0.887
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.886
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I 0.886