Bra008266 (Brassica rapa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bra008266 T322461_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL14
M02470_2.00
Arabidopsis thaliana
NNNRTACNN

NNGTAYNNN
PBM
Weirauch et al.(2014)
pTH8191
0.773 1.000
SPL14
M07253_2.00
Arabidopsis thaliana
NNNBGTACGGW

WCCGTACVNNN
Dap-seq
OMalley et al.(2016)
SPL14_col_a
0.773 1.000
SPL14
M11270_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SPL14_01
0.773 1.000
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008266.1-P SBP 1 38

Links

Other SBP family TFs
Other Brassica rapa TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10008169m.g Capsella rubella Carubv10008169m.g I 0.773
Bostr.7128s0689 Boechera stricta Bostr.7128s0689 I 0.773
Carubv10012577m.g Capsella rubella Carubv10012577m.g I 0.773
Thhalv10006656m.g Eutrema salsugineum Thhalv10006656m.g I 0.773
Thhalv10018065m.g Eutrema salsugineum Thhalv10018065m.g I 0.773
Thhalv10018054m.g Eutrema salsugineum Thhalv10018054m.g I 0.773
Bostr.20129s0096 Boechera stricta Bostr.20129s0096 I 0.773
TCM_034803 Theobroma cacao TCM_034803 I 0.773
Bo5g030930 Brassica oleracea Bo5g030930 I 0.773
Bo2g091010 Brassica oleracea Bo2g091010 I 0.773
Bo6g120690 Brassica oleracea Bo6g120690 I 0.773
Bra015732 Brassica rapa Bra015732 I 0.773
SPL14 Arabidopsis lyrata fgenesh2_kg.1__2292__AT1G20980.1 I 0.773
Bra025863 Brassica rapa Bra025863 I 0.773
SPL14 Arabidopsis thaliana AT1G20980 D 0.773