BRADI1G31390 (Brachypodium distachyon)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 BRADI1G31390 T322488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.906 0.800
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.893 0.800
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.886 0.800
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G31390.1 SBP 170 244

Links

Other SBP family TFs
Other Brachypodium distachyon TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL10 Oryza indica BGIOSGA023408 I 0.981
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.981
MLOC_326 Hordeum vulgare MLOC_326 I 0.981
OB06G31100 Oryza brachyantha OB06G31100 I 0.981
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.981
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.981
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.981
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.981
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.981
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.981
SPL10 Oryza sativa OS06G0659100 I 0.981
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.981
Si006559m.g Setaria italica Si006559m.g I 0.981
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.981
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.981
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.981
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.980
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.979
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.979
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.979
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.977
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.975
OB02G15090 Oryza brachyantha OB02G15090 I 0.975
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.975
Traes_7DL_1957A97EC Triticum aestivum Traes_7DL_1957A97EC N 0.975
OBART06G23500 Oryza barthii OBART06G23500 I 0.972
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.969
Si017338m.g Setaria italica Si017338m.g I 0.969
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.969
MLOC_6525 Hordeum vulgare MLOC_6525 I 0.968
TRIUR3_10193 Triticum urartu TRIUR3_10193 I 0.965
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.964
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.964
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.964
SPL5 Oryza sativa OS02G0177300 I 0.964
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.962
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.957
Cla020006 Citrullus lanatus Cla020006 I 0.944
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.943
F775_00761 Aegilops tauschii F775_00761 I 0.942
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.942
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.940
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.939
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.939
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.939
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.939
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.939
OB04G34990 Oryza brachyantha OB04G34990 I 0.939
OBART04G27990 Oryza barthii OBART04G27990 I 0.939
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.939
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.939
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.939
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.939
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.939
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.939
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.939
SPL8 Oryza sativa OS04G0656500 I 0.939
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.939
Si022315m.g Setaria italica Si022315m.g I 0.939
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.939
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.939
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.939
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.937
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.937
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.937
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.936
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.934
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.933
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.932
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.930
F775_20508 Aegilops tauschii F775_20508 N 0.927
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.927
Traes_7DL_2D8356B05 Triticum aestivum Traes_7DL_2D8356B05 N 0.927
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.922
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.922
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.918
29983.m003158 Ricinus communis 29983.m003158 I 0.917
GSMUA_Achr4G28960_001 Musa acuminata GSMUA_Achr4G28960_001 I 0.915
PGSC0003DMG400032817 Solanum tuberosum PGSC0003DMG400032817 I 0.909
SPL8 Arabidopsis thaliana AT1G02065 D 0.906
Bo5g001290 Brassica oleracea Bo5g001290 I 0.906
Bo8g118210 Brassica oleracea Bo8g118210 I 0.906
Bra032662 Brassica rapa Bra032662 I 0.906
Bra033221 Brassica rapa Bra033221 I 0.906
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.906
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.906
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.906
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.906
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.906
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.906
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.904
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.904
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.904
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.904
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.904
TCM_005622 Theobroma cacao TCM_005622 I 0.904
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.904
Ca_18942 Cicer arietinum Ca_18942 I 0.904
30174.m008803 Ricinus communis 30174.m008803 I 0.904
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.904
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.904
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.904
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.904
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.904
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.904
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.904
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.904
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.904
PK25779.1 Cannabis sativa PK25779.1 I 0.904
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.903
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.903
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.903
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.903
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.903
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.903
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.901
mgf016085m Mimulus guttatus mgf016085m I 0.901
MDP0000803116 Malus domestica MDP0000803116 I 0.901
Cla006776 Citrullus lanatus Cla006776 I 0.900
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.900
Bostr.23794s0714 Boechera stricta Bostr.23794s0714 I 0.895
Gorai.011G029400 Gossypium raimondii Gorai.011G029400 I 0.894
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.893
Bo4g042390 Brassica oleracea Bo4g042390 I 0.892
Bra005470 Brassica rapa Bra005470 I 0.892
Solyc07g053810.2 Solanum lycopersicum Solyc07g053810.2 I 0.892
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.891
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.891
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.888
GLYMA13G31090 Glycine max GLYMA13G31090 I 0.887
GLYMA15G08270 Glycine max GLYMA15G08270 I 0.887
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.887
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.887
Pm011381 Prunus mume Pm011381 I 0.887
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.886
Thhalv10017406m.g Eutrema salsugineum Thhalv10017406m.g I 0.886