CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G28460
(
Glycine max
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03110 (SBP)
IPR004333
GLYMA13G28460
T322585_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN
NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.968
0.827
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.968
0.827
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G28460.3
SBP
114
188
CQVPACEVDISELKGYHRRHRVCLRCANAATVMLNGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRK
Links
Other
SBP
family TFs
Other
Glycine max
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30170.m014243
Ricinus communis
30170.m014243
N
Aquca_095_00028
Aquilegia coerulea
Aquca_095_00028
N
BGIOSGA023284
Oryza indica
BGIOSGA023284
N
Ca_20172
Cicer arietinum
Ca_20172
N
Ciclev10002005m.g
Citrus clementina
Ciclev10002005m.g
N
Cla023847
Citrullus lanatus
Cla023847
N
Cucsa.272470
Cucumis sativus
Cucsa.272470
N
Eucgr.F01824
Eucalyptus grandis
Eucgr.F01824
N
Eucgr.L02193
Eucalyptus grandis
Eucgr.L02193
N
evm.TU.supercontig_438.4
Carica papaya
evm.TU.supercontig_438.4
N
gene29159-v1.0-hybrid
Fragaria vesca
gene29159-v1.0-hybrid
N
GLYMA02G19754
Glycine max
GLYMA02G19754
N
Gorai.009G309200
Gossypium raimondii
Gorai.009G309200
N
Gorai.012G007100
Gossypium raimondii
Gorai.012G007100
N
LPERR06G17810
Leersia perrieri
LPERR06G17810
N
Lus10040069.g
Linum usitatissimum
Lus10040069.g
N
mgf016987m
Mimulus guttatus
mgf016987m
N
mgf025972m
Mimulus guttatus
mgf025972m
N
MTR_1g050502
Medicago truncatula
MTR_1g050502
N
OB06G29280
Oryza brachyantha
OB06G29280
N
OBART06G21250
Oryza barthii
OBART06G21250
N
OGLUM06G22450
Oryza glumaepatula
OGLUM06G22450
N
OMERI01G31300
Oryza meridionalis
OMERI01G31300
N
ONIVA06G25200
Oryza nivara
ONIVA06G25200
N
OPUNC06G19380
Oryza punctata
OPUNC06G19380
N
orange1.1g022379m.g
Citrus sinensis
orange1.1g022379m.g
N
ORUFI06G22890
Oryza rufipogon
ORUFI06G22890
N
BZIP50
Oryza sativa
OS06G0622700
N
PGSC0003DMG400010008
Solanum tuberosum
PGSC0003DMG400010008
N
PK05989.1
Cannabis sativa
PK05989.1
N
Pm022886
Prunus mume
Pm022886
N
POPTR_0005s27930
Populus trichocarpa
POPTR_0005s27930
N
SapurV1A.0554s0190
Salix purpurea
SapurV1A.0554s0190
N
Solyc04g082890.2
Solanum lycopersicum
Solyc04g082890.2
N
TCM_034804
Theobroma cacao
TCM_034804
N
ATBZIP60
Vitis vinifera
VIT_18s0122g00500
N