GLYMA16G05895 (Glycine max)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GLYMA16G05895 T322592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.938 0.787
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G05895.1 SBP 75 149
GLYMA16G05895.2 SBP 75 149

Links

Other SBP family TFs
Other Glycine max TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA19G26390 Glycine max GLYMA19G26390 I 0.984
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.975
Ca_24733 Cicer arietinum Ca_24733 I 0.973
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I 0.969
Si026656m.g Setaria italica Si026656m.g I 0.965
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.965
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.959
TCM_014668 Theobroma cacao TCM_014668 I 0.959
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.958
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.958
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.957
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.955
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.955
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.954
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.954
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.953
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.953
PK19500.1 Cannabis sativa PK19500.1 I 0.953
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.952
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.952
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.952
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.950
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.950
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.949
Cla004156 Citrullus lanatus Cla004156 I 0.949
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.949
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.948
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.948
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.947
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.947
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.947
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.947
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.947
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.947
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.947
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.947
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.947
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.947
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.947
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.947
Cla002666 Citrullus lanatus Cla002666 I 0.947
Pm024528 Prunus mume Pm024528 I 0.947
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.947
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.946
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.946
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.945
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.945
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.944
29929.m004627 Ricinus communis 29929.m004627 I 0.944
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.944
PK02140.1 Cannabis sativa PK02140.1 I 0.944
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.943
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.943
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.943
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.943
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.943
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.943
Ca_01426 Cicer arietinum Ca_01426 I 0.943
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.943
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.942
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.941
TCM_008671 Theobroma cacao TCM_008671 I 0.941
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.941
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.941
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.941
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.941
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.941
Bo9g097630 Brassica oleracea Bo9g097630 I 0.940
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.940
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.940
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.939
Ca_05711 Cicer arietinum Ca_05711 I 0.939
SPL13A Arabidopsis thaliana AT5G50570 I 0.938
SPL13A Arabidopsis thaliana AT5G50670 D 0.938
Bo3g024180 Brassica oleracea Bo3g024180 I 0.938
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.938
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.938
Bra022766 Brassica rapa Bra022766 I 0.937
OS01G0922600 Oryza sativa OS01G0922600 I 0.937
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.937
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.937
Cla019579 Citrullus lanatus Cla019579 I 0.936
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.936
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.935
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.935
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.934
SapurV1A.0173s0270 Salix purpurea SapurV1A.0173s0270 I 0.932
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.931
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.931
SPL19 Oryza sativa OS11G0496600 I 0.931
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.930
OBART01G42150 Oryza barthii OBART01G42150 I 0.930
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.930
POPTR_0003s16780 Populus trichocarpa POPTR_0003s16780 I 0.928
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.928
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.928
PK14243.1 Cannabis sativa PK14243.1 N 0.928
cassava17811.valid.m1 Manihot esculenta cassava17811.valid.m1 I 0.927
MDP0000119458 Malus domestica MDP0000119458 I 0.927
MDP0000193702 Malus domestica MDP0000193702 I 0.927
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.925
POPTR_0001s13630 Populus trichocarpa POPTR_0001s13630 I 0.925
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.925
SapurV1A.1460s0110 Salix purpurea SapurV1A.1460s0110 I 0.925
Gorai.001G057700 Gossypium raimondii Gorai.001G057700 I 0.924
PRUPE_ppa007202mg Prunus persica PRUPE_ppa007202mg I 0.922
Si001804m.g Setaria italica Si001804m.g I 0.922
Pm016138 Prunus mume Pm016138 I 0.922
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.922
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.922
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.919
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.919
Cla001541 Citrullus lanatus Cla001541 I 0.919
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.919
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.918
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.916
Aquca_040_00115 Aquilegia coerulea Aquca_040_00115 N 0.912
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.911
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.911
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.911
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.911
GRMZM2G138421 Zea mays GRMZM2G138421 I 0.909
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.907
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.907
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.907
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.907
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.907
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.907
Ca_19449 Cicer arietinum Ca_19449 I 0.907
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.907
Bo3g042890 Brassica oleracea Bo3g042890 I 0.906
TCM_011483 Theobroma cacao TCM_011483 I 0.906
MDP0000146640 Malus domestica MDP0000146640 I 0.906
MDP0000778465 Malus domestica MDP0000778465 I 0.906
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.905
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.905
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.905
30138.m003942 Ricinus communis 30138.m003942 I 0.905
Pm025028 Prunus mume Pm025028 I 0.904
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.903
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.903
SPL16 Oryza sativa OS08G0531600 I 0.903
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.903
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.903
TCM_014330 Theobroma cacao TCM_014330 I 0.903
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.903
Cla019331 Citrullus lanatus Cla019331 I 0.903
30174.m009082 Ricinus communis 30174.m009082 I 0.903
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.903
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.903
PK17790.1 Cannabis sativa PK17790.1 I 0.903
gene22888-v1.0-hybrid Fragaria vesca gene22888-v1.0-hybrid I 0.902
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.902
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.901
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.901
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.900
OBART09G15750 Oryza barthii OBART09G15750 I 0.900
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.900
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.900
SPL18 Oryza sativa OS09G0507100 I 0.900
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.898
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.898
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.898
30147.m014478 Ricinus communis 30147.m014478 I 0.898
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.897
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.897
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.897
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.897
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.897
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.897
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.897
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.897
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.896
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.896
MDP0000142582 Malus domestica MDP0000142582 N 0.896
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.895
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.895
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.895
Si013151m.g Setaria italica Si013151m.g I 0.895
Cla018827 Citrullus lanatus Cla018827 I 0.895
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.895
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I 0.895
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.895
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.894
Pm030597 Prunus mume Pm030597 I 0.894
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.894
Bo6g031220 Brassica oleracea Bo6g031220 I 0.892
Bra039656 Brassica rapa Bra039656 I 0.892
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.891
SPL6 Arabidopsis thaliana AT1G69170 I 0.890
MDP0000171877 Malus domestica MDP0000171877 I 0.890
MDP0000246046 Malus domestica MDP0000246046 I 0.890
MDP0000263766 Malus domestica MDP0000263766 I 0.890
SapurV1A.0118s0110 Salix purpurea SapurV1A.0118s0110 I 0.889
SapurV1A.3749s0010 Salix purpurea SapurV1A.3749s0010 I 0.889
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.888
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.888
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.888
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.887
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I 0.886
LPERR08G17180 Leersia perrieri LPERR08G17180 I 0.886
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I 0.886