GSMUA_Achr4G28960_001 (Musa acuminata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 GSMUA_Achr4G28960_001 T322658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.960 0.867
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.920 0.787
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.915 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P28960_001 SBP 661 735

Links

Other SBP family TFs
Other Musa acuminata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr2G11940_001 Musa acuminata GSMUA_Achr2G11940_001 I 0.983
Aquca_024_00116 Aquilegia coerulea Aquca_024_00116 I 0.978
GSMUA_Achr4G24610_001 Musa acuminata GSMUA_Achr4G24610_001 I 0.976
GSMUA_Achr7G08750_001 Musa acuminata GSMUA_Achr7G08750_001 I 0.966
SPL8 Arabidopsis thaliana AT1G02065 D 0.960
Bo5g001290 Brassica oleracea Bo5g001290 I 0.960
Bo8g118210 Brassica oleracea Bo8g118210 I 0.960
Bra032662 Brassica rapa Bra032662 I 0.960
Bra033221 Brassica rapa Bra033221 I 0.960
SPL8 Arabidopsis lyrata fgenesh2_kg.1__23__AT1G02065.1 I 0.960
POPTR_0002s14320 Populus trichocarpa POPTR_0002s14320 I 0.960
POPTR_0014s05680 Populus trichocarpa POPTR_0014s05680 I 0.960
TCM_005622 Theobroma cacao TCM_005622 I 0.960
30174.m008803 Ricinus communis 30174.m008803 I 0.960
cassava19899.m1 Manihot esculenta cassava19899.m1 I 0.960
Bostr.5325s0127 Boechera stricta Bostr.5325s0127 I 0.960
Cagra.1968s0141 Capsella grandiflora Cagra.1968s0141 I 0.960
Carubv10009506m.g Capsella rubella Carubv10009506m.g I 0.960
Ciclev10021106m.g Citrus clementina Ciclev10021106m.g I 0.960
Eucgr.E01600 Eucalyptus grandis Eucgr.E01600 I 0.960
evm.TU.supercontig_149.10 Carica papaya evm.TU.supercontig_149.10 I 0.960
Gorai.001G176000 Gossypium raimondii Gorai.001G176000 I 0.960
Gorai.008G107400 Gossypium raimondii Gorai.008G107400 I 0.960
orange1.1g020302m.g Citrus sinensis orange1.1g020302m.g I 0.960
SapurV1A.0382s0100 Salix purpurea SapurV1A.0382s0100 I 0.960
Thhalv10008083m.g Eutrema salsugineum Thhalv10008083m.g I 0.960
GLYMA03G27180 Glycine max GLYMA03G27180 I 0.959
GLYMA07G14610 Glycine max GLYMA07G14610 I 0.959
PGSC0003DMG400026027 Solanum tuberosum PGSC0003DMG400026027 I 0.959
PGSC0003DMG400029162 Solanum tuberosum PGSC0003DMG400029162 I 0.959
Solyc01g090730.2 Solanum lycopersicum Solyc01g090730.2 I 0.959
Solyc10g018780.1 Solanum lycopersicum Solyc10g018780.1 I 0.959
Ca_18942 Cicer arietinum Ca_18942 I 0.959
Cla006776 Citrullus lanatus Cla006776 I 0.959
mgf016085m Mimulus guttatus mgf016085m I 0.959
gene04786-v1.0-hybrid Fragaria vesca gene04786-v1.0-hybrid I 0.959
MDP0000803116 Malus domestica MDP0000803116 I 0.959
PK25779.1 Cannabis sativa PK25779.1 I 0.959
GSMUA_Achr4G20590_001 Musa acuminata GSMUA_Achr4G20590_001 I 0.958
MTR_8g005960 Medicago truncatula MTR_8g005960 I 0.957
GSMUA_Achr3G00810_001 Musa acuminata GSMUA_Achr3G00810_001 I 0.956
GSMUA_Achr10G06210_001 Musa acuminata GSMUA_Achr10G06210_001 I 0.955
Lus10028181.g Linum usitatissimum Lus10028181.g I 0.955
AMTR_s00019p00235390 Amborella trichopoda AMTR_s00019p00235390 I 0.954
Lus10042882.g Linum usitatissimum Lus10042882.g I 0.954
SPL8 Vitis vinifera VIT_15s0021g02300 I 0.953
SapurV1A.0033s0300 Salix purpurea SapurV1A.0033s0300 I 0.953
fgenesh1_pg.scaffold_337000032 Physcomitrella patens fgenesh1_pg.scaffold_337000032 I 0.944
BGIOSGA007655 Oryza indica BGIOSGA007655 I 0.940
GLYMA01G15258 Glycine max GLYMA01G15258 I 0.940
OMERI02G06720 Oryza meridionalis OMERI02G06720 I 0.940
ORGLA02G0053800 Oryza glaberrima ORGLA02G0053800 I 0.940
SPL5 Oryza sativa OS02G0177300 I 0.940
cassava13944.valid.m1 Manihot esculenta cassava13944.valid.m1 I 0.940
Cucsa.120620 Cucumis sativus Cucsa.120620 I 0.938
PRUPE_ppa008560mg Prunus persica PRUPE_ppa008560mg I 0.937
Pm017777 Prunus mume Pm017777 I 0.937
GRMZM2G168229 Zea mays GRMZM2G168229 I 0.935
Si017338m.g Setaria italica Si017338m.g I 0.935
GSMUA_Achr7G05010_001 Musa acuminata GSMUA_Achr7G05010_001 I 0.932
SELMODRAFT_28629 Selaginella moellendorffii SELMODRAFT_28629 I 0.929
SELMODRAFT_59884 Selaginella moellendorffii SELMODRAFT_59884 I 0.929
SELMODRAFT_7674 Selaginella moellendorffii SELMODRAFT_7674 I 0.929
fgenesh1_pg.scaffold_118000004 Physcomitrella patens fgenesh1_pg.scaffold_118000004 I 0.929
SELMODRAFT_17777 Selaginella moellendorffii SELMODRAFT_17777 I 0.928
LPERR02G05080 Leersia perrieri LPERR02G05080 I 0.925
OB02G15090 Oryza brachyantha OB02G15090 I 0.925
SELMODRAFT_49502 Selaginella moellendorffii SELMODRAFT_49502 I 0.925
SELMODRAFT_59543 Selaginella moellendorffii SELMODRAFT_59543 I 0.925
OPUNC02G05050 Oryza punctata OPUNC02G05050 I 0.921
SPL10 Oryza indica BGIOSGA023408 I 0.920
GRMZM2G101499 Zea mays GRMZM2G101499 I 0.920
LPERR06G19480 Leersia perrieri LPERR06G19480 I 0.920
MLOC_326 Hordeum vulgare MLOC_326 I 0.920
OB06G31100 Oryza brachyantha OB06G31100 I 0.920
OGLUM06G24700 Oryza glumaepatula OGLUM06G24700 I 0.920
OMERI06G23430 Oryza meridionalis OMERI06G23430 I 0.920
ONIVA01G24470 Oryza nivara ONIVA01G24470 I 0.920
OPUNC06G21190 Oryza punctata OPUNC06G21190 I 0.920
ORGLA06G0196600 Oryza glaberrima ORGLA06G0196600 I 0.920
ORUFI06G25170 Oryza rufipogon ORUFI06G25170 I 0.920
SPL10 Oryza sativa OS06G0659100 I 0.920
Sb10g026200 Sorghum bicolor Sb10g026200 I 0.920
Si006559m.g Setaria italica Si006559m.g I 0.920
Traes_7DL_ED348696E Triticum aestivum Traes_7DL_ED348696E I 0.920
Cla020006 Citrullus lanatus Cla020006 I 0.920
fgenesh1_pg.scaffold_194000034 Physcomitrella patens fgenesh1_pg.scaffold_194000034 D 0.920
Pavir.Da00293 Panicum virgatum Pavir.Da00293 I 0.920
Pavir.Db00525 Panicum virgatum Pavir.Db00525 I 0.920
TRIUR3_34424 Triticum urartu TRIUR3_34424 N 0.916
Cucsa.126820 Cucumis sativus Cucsa.126820 I 0.916
BRADI1G31390 Brachypodium distachyon BRADI1G31390 I 0.915
fgenesh1_pg.scaffold_252000020 Physcomitrella patens fgenesh1_pg.scaffold_252000020 D 0.915
BRADI3G05720 Brachypodium distachyon BRADI3G05720 I 0.914
GRMZM2G111136 Zea mays GRMZM2G111136 I 0.914
MLOC_51510 Hordeum vulgare MLOC_51510 I 0.914
Sb04g005180 Sorghum bicolor Sb04g005180 I 0.914
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.914
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.914
MDP0000158607 Malus domestica MDP0000158607 I 0.913
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.910
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.910
fgenesh1_pg.scaffold_50000085 Physcomitrella patens fgenesh1_pg.scaffold_50000085 I 0.909
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.908
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.908
Ca_16243 Cicer arietinum Ca_16243 I 0.908
BGIOSGA017275 Oryza indica BGIOSGA017275 I 0.906
BRADI5G24670 Brachypodium distachyon BRADI5G24670 I 0.906
GRMZM2G036297 Zea mays GRMZM2G036297 I 0.906
LPERR04G23580 Leersia perrieri LPERR04G23580 I 0.906
MLOC_57503 Hordeum vulgare MLOC_57503 I 0.906
OB04G34990 Oryza brachyantha OB04G34990 I 0.906
OBART04G27990 Oryza barthii OBART04G27990 I 0.906
OGLUM04G27880 Oryza glumaepatula OGLUM04G27880 I 0.906
OLONG_021174 Oryza longistaminata OLONG_021174 I 0.906
OMERI04G23390 Oryza meridionalis OMERI04G23390 I 0.906
ONIVA04G26660 Oryza nivara ONIVA04G26660 I 0.906
OPUNC04G25460 Oryza punctata OPUNC04G25460 I 0.906
ORGLA04G0242500 Oryza glaberrima ORGLA04G0242500 I 0.906
ORUFI04G29620 Oryza rufipogon ORUFI04G29620 I 0.906
SPL8 Oryza sativa OS04G0656500 I 0.906
Sb06g031290 Sorghum bicolor Sb06g031290 I 0.906
Si022315m.g Setaria italica Si022315m.g I 0.906
TRIUR3_34351 Triticum urartu TRIUR3_34351 I 0.906
Pavir.Ga00066 Panicum virgatum Pavir.Ga00066 I 0.906
Pavir.Gb00284 Panicum virgatum Pavir.Gb00284 I 0.906
AMTR_s00106p00144050 Amborella trichopoda AMTR_s00106p00144050 I 0.905
GRMZM2G058588 Zea mays GRMZM2G058588 I 0.904
PRUPE_ppa022739mg Prunus persica PRUPE_ppa022739mg I 0.902
Pm011381 Prunus mume Pm011381 I 0.902
MDP0000156994 Malus domestica MDP0000156994 I 0.900
MDP0000861601 Malus domestica MDP0000861601 I 0.900
fgenesh1_pg.scaffold_23000047 Physcomitrella patens fgenesh1_pg.scaffold_23000047 I 0.897
gene29726-v1.0-hybrid Fragaria vesca gene29726-v1.0-hybrid I 0.896
Cla023735 Citrullus lanatus Cla023735 I 0.893
Cucsa.196000 Cucumis sativus Cucsa.196000 I 0.893
OBART06G23500 Oryza barthii OBART06G23500 I 0.891
Eucgr.E03260 Eucalyptus grandis Eucgr.E03260 I 0.890
Pavir.Ab00520 Panicum virgatum Pavir.Ab00520 I 0.890
mgf001295m Mimulus guttatus mgf001295m I 0.887